G1566714


Basic Information

Item Value
gene id G1566714
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57692911 ~ 57760375 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1792434
TACACCCCTCAGTCTTCTCACATCTGAGGAGCAAAACAAAACTATTTCAGCGGACATGGACCACCAGGAGGTTATATTACTGTGCACCATGACAGATCCCCCTCAGCCTCTGTATATGCAAACTCatttgtgagaggtgtgtgtgcgaTTTCAGGCCTGGATGGGTGTGTGATGATTGGAAGAAGTCGTGaagagtgtgtgtgtgtgtgtaacatatatatataatatatatatacacacacactggcaaaggAAATATCTGATAACTTTTCCATTATTCGTTCAAATTCTAAAGAGtacatgatttatttattttcattaatATCTTGGAAATCAGAAAGGGGACAGTGGGAgaataaccctaaatctaacaaATAGAAGTTTGCCTCTAATTCAAAATGTATCTAAAGAGGTAGATAAAAAATAAAACGggtggagaaagggaggaggaataataatCGTCACTTATGCCCCTCGTGGACATCAGCGCGAGGTTGAACCACGTGAGCACGCACGAGTCCATGCAGAGAAGTGTTCCTGGGGGGACTGAGGTATCGCAGCGAGCGCGTGGGCGCTAGGCGGGGTGAGGGCGCGTGCCACCACAAACCCCCCTCAGCTGAGGTAGACAGCGTTCTACTGTGGAAGCATGGATACACACGAGCACTTTTACCACAATCAAAACATATTTACATTCTGCATGAAATCAAAAAAAAGGAAAAACTTGGGTATTTTGTTATCGGTTTTTtgtaactattttttttttttttttacttatcttTCCCATCCCAATCAAGGTCAATTTAGTACATTTTCTTGTGTGCATCTTGGATTTTTGTGATGAATAACAATTGAAACTCACTTCAATCAAGATTACAGCTGCTGGTTAAACAAAACTCAACCTTTAGTTAACATAGCTTCTATAGCAAAATAAGCATCCATCAGTGTGACTCCCCTTACTTTCACCATGCAGTGAATGACACTAACGTAGACCAACTGCGGCTACTGGGGCCACCACACATGGCCAAGCTTCCTCTATGAAAAAACCCTAGTCAGGCTGTGGACTGCACTTCAGCCTGTCACAAACCTGGGATgacttccaaatggcaccctatttccccaTGTAGTATACAACTTGGAGCACTATAAGGGAAATGGGGTACCATTTGAGACTAGGATGATGTAATAAAGCAGGTAAGGCCTAAGCAGGTAAAAGaaatacaacagaacagacagTGCTGCTCTAACATGTCCATTTCTATGgcggctacagagagagagagaactcagtGTTCAGGCCCCTCCATTTGTGTGCTACCCATTGCACTTCCAGGAAGGCAAAAGGAAAAATCATTGTGTGAAAAATGTAACGTACCGTCAACAATAAGAATGTCAGAATCCCAAAACTAAACAGCATTGCTGCAATATGTACGGTTGGCATTATTCAGCATTACTCTAATATATTCGTTGTTTGTAGTTTTCATTAGATGGTGGATACACCTCAGGAAAACTGAGGCAATTTCTTCTCGATACTCCCGTCAGCAGCCAACAGTTTGGTGCCAACTCTGCCCTGGGCTCTATGTACAGAGACTTTATGAACAGGGCCACCGTCGACAGACACCTTGTACACGTTGCCGCCGCCGGAGAGCGATAGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1792434 True 1652 lncRNA 0.43 2 57692911 57760375

Neighbor

gene id symbol gene type direction distance location
LOC118941192 NA coding downstream 36096 57652774 ~ 57656815 (-)
fam221a fam221a coding downstream 64602 57599288 ~ 57628309 (-)
LOC110496583 LOC100380778 coding downstream 112448 57577413 ~ 57580463 (-)
LOC110496865 LOC106588853 coding downstream 125106 57496639 ~ 57567805 (-)
LOC110496581 LOC106588859 coding downstream 266908 57418906 ~ 57427510 (-)
rftn1a LOC106588880 coding upstream 6125 57766500 ~ 57812891 (-)
dazl dazl coding upstream 62358 57822733 ~ 57831166 (-)
LOC110496952 LOC106588868 coding upstream 78344 57838719 ~ 57848361 (-)
LOC110496593 tbc1d5 coding upstream 179238 57939613 ~ 57966150 (-)
LOC110496867 LOC106588885 coding upstream 236552 57996927 ~ 58019631 (-)
G1566716 NA non-coding downstream 454 57692082 ~ 57692457 (-)
G1566688 NA non-coding downstream 41123 57651073 ~ 57651788 (-)
G1566685 NA non-coding downstream 44094 57647034 ~ 57648817 (-)
G1566683 NA non-coding downstream 48883 57642739 ~ 57644028 (-)
G1566667 LOC106588871 non-coding downstream 59796 57631777 ~ 57633115 (-)
G1566713 NA non-coding upstream 4127 57764502 ~ 57765171 (-)
G1566828 NA non-coding upstream 101531 57861906 ~ 57863122 (-)
G1566839 NA non-coding upstream 138586 57898961 ~ 57901421 (-)
G1566857 NA non-coding upstream 170646 57931021 ~ 57931904 (-)
G1566806 NA non-coding upstream 183282 57943657 ~ 57944600 (-)
LOC110496560 LOC106588840 other downstream 955564 56728341 ~ 56737381 (-)
G1565122 LOC106613431 other downstream 1204622 56481468 ~ 56488289 (-)
G1563253 NA other downstream 3027268 54660626 ~ 54665643 (-)
LOC110496860 LOC106588819 other downstream 3040061 54636849 ~ 54652932 (-)
mrpl3 mrpl3 other downstream 3797962 53887137 ~ 53895002 (-)
G1566899 NA other upstream 267136 58027511 ~ 58027790 (-)
G1566923 NA other upstream 315248 58074209 ~ 58078146 (-)
G1566972 NA other upstream 407009 58167384 ~ 58167697 (-)
G1567080 NA other upstream 650124 58410499 ~ 58411129 (-)
G1567875 NA other upstream 1108988 58869363 ~ 58870007 (-)

Expression


Co-expression Network