G1566194


Basic Information

Item Value
gene id G1566194
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57821610 ~ 57885127 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1791806
taaaataaaagtatctttacttttcctcaagtatgacaattgggtactttttccagcaCTGGAAACAGGTCAACAGTTTTGGAACACTGAGCCATTGACTACACCAAGTGGCTGCGTTAGGAGTGGGTTTGTTTTGACAACAAGACACCGGACTACACCCATACAGTGTATActgaaagtattcagtccccttgactttttccacattttgttacattacagccttattctaaaatgtattacattgtttttttccccacaacaatctacacacaataccccataataacaaaacaagaacaggtttttaaaaatgtttgcaaatgtataaaaataaaaactgaaatataaaatgtacataagtattcagaccctttactcagtacttgaagtacttgaagcacctttggcagcgatgacagcctagattcttcttgggtatggcactactagcttggcac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1791806 True 461 lncRNA 0.36 2 57821610 57885127

Neighbor

gene id symbol gene type direction distance location
oxnad1 oxnad1 coding upstream 61194 57744249 ~ 57760416 (+)
LOC110496589 galnt15 coding upstream 78923 57729944 ~ 57742687 (+)
LOC110496587 LOC106588873 coding upstream 126745 57657065 ~ 57694865 (+)
tra2a LOC106588872 coding upstream 172791 57642685 ~ 57648819 (+)
LOC110496585 LOC106588871 coding upstream 188896 57628437 ~ 57632714 (+)
LOC110496592 LOC106588883 coding downstream 8727 57893854 ~ 57935297 (+)
LOC110496868 LOC106588864 coding downstream 180357 58065484 ~ 58140619 (+)
LOC110496594 LOC106588886 coding downstream 297350 58182477 ~ 58187784 (+)
LOC110496595 LOC106588888 coding downstream 303665 58188792 ~ 58212558 (+)
LOC110496954 LOC106588892 coding downstream 441003 58326130 ~ 58338076 (+)
G1566158 LOC106570535 non-coding upstream 52474 57768386 ~ 57769136 (+)
G1566109 NA non-coding upstream 166116 57655273 ~ 57655494 (+)
G1566024 NA non-coding upstream 300743 57520038 ~ 57520867 (+)
G1565938 NA non-coding upstream 380370 57439717 ~ 57441240 (+)
G1565977 NA non-coding upstream 391825 57429492 ~ 57429785 (+)
G1566267 NA non-coding downstream 88277 57973404 ~ 57976373 (+)
G1566269 NA non-coding downstream 96472 57981599 ~ 57981812 (+)
G1566278 NA non-coding downstream 111848 57996975 ~ 57997466 (+)
G1566279 LOC106588885 non-coding downstream 113312 57998439 ~ 57999085 (+)
G1566281 NA non-coding downstream 114135 57999262 ~ 57999524 (+)
LOC110496571 hoxa7aa other upstream 709647 57109128 ~ 57112335 (+)
G1565672 NA other upstream 789647 57031621 ~ 57031963 (+)
LOC110496862 LOC106588838 other upstream 1652407 56028870 ~ 56504444 (+)
G1564638 LOC106607612 other upstream 1769817 56050588 ~ 56051793 (+)
G1564470 NA other upstream 1912676 55908085 ~ 55908934 (+)
G1566224 tbc1d5 other downstream 55970 57941097 ~ 57946763 (+)
G1566445 LOC106588893 other downstream 479129 58364256 ~ 58377006 (+)
LOC110496618 LOC106588914 other downstream 985772 58864013 ~ 58873692 (+)
dlx5a dlx5 other downstream 1071994 58957121 ~ 58959671 (+)

Expression


Co-expression Network