Gene
RNA
| Item | Value |
|---|---|
| gene id | G1566828 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57861906 ~ 57863122 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: uncharacterized protein LOC109615393 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1792559 | True | 812 | lncRNA | 0.42 | 2 | 57861906 | 57863122 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496952 | LOC106588868 | coding | downstream | 13545 | 57838719 ~ 57848361 (-) |
| dazl | dazl | coding | downstream | 30740 | 57822733 ~ 57831166 (-) |
| rftn1a | LOC106588880 | coding | downstream | 49015 | 57766500 ~ 57812891 (-) |
| LOC110496588 | LOC106588875 | coding | downstream | 146253 | 57699114 ~ 57715653 (-) |
| LOC118941192 | NA | coding | downstream | 205091 | 57652774 ~ 57656815 (-) |
| LOC110496593 | tbc1d5 | coding | upstream | 76491 | 57939613 ~ 57966150 (-) |
| LOC110496867 | LOC106588885 | coding | upstream | 133805 | 57996927 ~ 58019631 (-) |
| sgo1 | LOC106588889 | coding | upstream | 350107 | 58213229 ~ 58223674 (-) |
| LOC110496870 | LOC106588890 | coding | upstream | 375348 | 58238470 ~ 58295781 (-) |
| LOC110496599 | LOC106588891 | coding | upstream | 439705 | 58302827 ~ 58306500 (-) |
| G1566713 | NA | non-coding | downstream | 96735 | 57764502 ~ 57765171 (-) |
| G1566715 | NA | non-coding | downstream | 99927 | 57756382 ~ 57761979 (-) |
| G1566714 | NA | non-coding | downstream | 101531 | 57692911 ~ 57760375 (-) |
| G1566748 | NA | non-coding | downstream | 127515 | 57734123 ~ 57734391 (-) |
| G1566716 | NA | non-coding | downstream | 169449 | 57692082 ~ 57692457 (-) |
| G1566839 | NA | non-coding | upstream | 35839 | 57898961 ~ 57901421 (-) |
| G1566857 | NA | non-coding | upstream | 67899 | 57931021 ~ 57931904 (-) |
| G1566806 | NA | non-coding | upstream | 80535 | 57943657 ~ 57944600 (-) |
| G1566871 | NA | non-coding | upstream | 110283 | 57973405 ~ 57976522 (-) |
| G1566879 | NA | non-coding | upstream | 128228 | 57991350 ~ 57991689 (-) |
| LOC110496560 | LOC106588840 | other | downstream | 1124559 | 56728341 ~ 56737381 (-) |
| G1565122 | LOC106613431 | other | downstream | 1373617 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 3196263 | 54660626 ~ 54665643 (-) |
| LOC110496860 | LOC106588819 | other | downstream | 3209056 | 54636849 ~ 54652932 (-) |
| mrpl3 | mrpl3 | other | downstream | 3966957 | 53887137 ~ 53895002 (-) |
| G1566899 | NA | other | upstream | 164389 | 58027511 ~ 58027790 (-) |
| G1566923 | NA | other | upstream | 212501 | 58074209 ~ 58078146 (-) |
| G1566972 | NA | other | upstream | 304262 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 547377 | 58410499 ~ 58411129 (-) |
| G1567875 | NA | other | upstream | 1006241 | 58869363 ~ 58870007 (-) |
