G1566857


Basic Information

Item Value
gene id G1566857
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57931021 ~ 57931904 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1792595
GTAACTCTCCGGTGTTTATAGTTGCGGTAACTCTCCGGTGTTtatagttttatttttttatttttattttttttacccccttttctccccaatttcgtggtatccaattgttagtagctactatcttgtctcattgctacaactcccgtacgggctcgggagagacgaaggctgaatgtTGTTTATAGTTGCGGTACCTCTCCAGTGTTTATAGTTGTTTAGTCGTCCGAAAGAGTTGGAAACCTTACCTTGCTTGGCCATGCTGttggtcatgtaactgtttgttacatgcagtaACGGTacattcagaccacttgactttttctacattttgttaagttacagccttgtcCTAAAAAAAtgtcaattgttttttcccctcatcaatctacacccagtactctataatgacaaagcaagttTTTGACATCTTTGCAAAAAtatatttccataagtattcagaccctgtactcagta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1792595 True 477 lncRNA 0.38 2 57931021 57931904

Neighbor

gene id symbol gene type direction distance location
LOC110496952 LOC106588868 coding downstream 82660 57838719 ~ 57848361 (-)
dazl dazl coding downstream 99855 57822733 ~ 57831166 (-)
rftn1a LOC106588880 coding downstream 118130 57766500 ~ 57812891 (-)
LOC110496588 LOC106588875 coding downstream 215368 57699114 ~ 57715653 (-)
LOC118941192 NA coding downstream 274206 57652774 ~ 57656815 (-)
LOC110496593 tbc1d5 coding upstream 7709 57939613 ~ 57966150 (-)
LOC110496867 LOC106588885 coding upstream 65023 57996927 ~ 58019631 (-)
sgo1 LOC106588889 coding upstream 281325 58213229 ~ 58223674 (-)
LOC110496870 LOC106588890 coding upstream 306566 58238470 ~ 58295781 (-)
LOC110496599 LOC106588891 coding upstream 370923 58302827 ~ 58306500 (-)
G1566839 NA non-coding downstream 29600 57898961 ~ 57901421 (-)
G1566828 NA non-coding downstream 67899 57861906 ~ 57863122 (-)
G1566713 NA non-coding downstream 165850 57764502 ~ 57765171 (-)
G1566715 NA non-coding downstream 169042 57756382 ~ 57761979 (-)
G1566714 NA non-coding downstream 170646 57692911 ~ 57760375 (-)
G1566806 NA non-coding upstream 11753 57943657 ~ 57944600 (-)
G1566871 NA non-coding upstream 41501 57973405 ~ 57976522 (-)
G1566879 NA non-coding upstream 59446 57991350 ~ 57991689 (-)
G1566880 NA non-coding upstream 60471 57992375 ~ 57992647 (-)
G1566883 NA non-coding upstream 62853 57994757 ~ 57995217 (-)
LOC110496560 LOC106588840 other downstream 1193674 56728341 ~ 56737381 (-)
G1565122 LOC106613431 other downstream 1442732 56481468 ~ 56488289 (-)
G1563253 NA other downstream 3265378 54660626 ~ 54665643 (-)
LOC110496860 LOC106588819 other downstream 3278171 54636849 ~ 54652932 (-)
mrpl3 mrpl3 other downstream 4036072 53887137 ~ 53895002 (-)
G1566899 NA other upstream 95607 58027511 ~ 58027790 (-)
G1566923 NA other upstream 143719 58074209 ~ 58078146 (-)
G1566972 NA other upstream 235480 58167384 ~ 58167697 (-)
G1567080 NA other upstream 478595 58410499 ~ 58411129 (-)
G1567875 NA other upstream 937459 58869363 ~ 58870007 (-)

Expression


Co-expression Network