Gene
RNA
| Item | Value |
|---|---|
| gene id | G1566224 |
| gene name | tbc1d5 |
| gene type | unknown |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57941097 ~ 57946763 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| symbol | description |
|---|---|
| tbc1d5 | Predicted to enable GTPase activator activity. Predicted to be involved in activation of GTPase activity and intracellular protein transport. Is expressed in neural crest. Orthologous to human TBC1D5 (TBC1 domain family member 5). |
| description |
|---|
| PREDICTED: TBC1 domain family member 5 isoform X2 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791846 | True | 703 | TUCP | 0.56 | 4 | 57941097 | 57946763 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496592 | LOC106588883 | coding | upstream | 5800 | 57893854 ~ 57935297 (+) |
| LOC110496591 | LOC106588881 | coding | upstream | 70736 | 57851179 ~ 57870361 (+) |
| oxnad1 | oxnad1 | coding | upstream | 180681 | 57744249 ~ 57760416 (+) |
| LOC110496589 | galnt15 | coding | upstream | 198410 | 57729944 ~ 57742687 (+) |
| LOC110496587 | LOC106588873 | coding | upstream | 246232 | 57657065 ~ 57694865 (+) |
| LOC110496868 | LOC106588864 | coding | downstream | 118721 | 58065484 ~ 58140619 (+) |
| LOC110496594 | LOC106588886 | coding | downstream | 235714 | 58182477 ~ 58187784 (+) |
| LOC110496595 | LOC106588888 | coding | downstream | 242029 | 58188792 ~ 58212558 (+) |
| LOC110496954 | LOC106588892 | coding | downstream | 379367 | 58326130 ~ 58338076 (+) |
| LOC118941193 | NA | coding | downstream | 431932 | 58378682 ~ 58383251 (+) |
| G1566194 | NA | non-coding | upstream | 55970 | 57821610 ~ 57885127 (+) |
| G1566217 | NA | non-coding | upstream | 91140 | 57846829 ~ 57849957 (+) |
| G1566158 | LOC106570535 | non-coding | upstream | 171961 | 57768386 ~ 57769136 (+) |
| G1566109 | NA | non-coding | upstream | 285603 | 57655273 ~ 57655494 (+) |
| G1566024 | NA | non-coding | upstream | 420230 | 57520038 ~ 57520867 (+) |
| G1566267 | NA | non-coding | downstream | 26641 | 57973404 ~ 57976373 (+) |
| G1566269 | NA | non-coding | downstream | 34836 | 57981599 ~ 57981812 (+) |
| G1566278 | NA | non-coding | downstream | 50212 | 57996975 ~ 57997466 (+) |
| G1566279 | LOC106588885 | non-coding | downstream | 51676 | 57998439 ~ 57999085 (+) |
| G1566281 | NA | non-coding | downstream | 52499 | 57999262 ~ 57999524 (+) |
| LOC110496571 | hoxa7aa | other | upstream | 829134 | 57109128 ~ 57112335 (+) |
| G1565672 | NA | other | upstream | 909134 | 57031621 ~ 57031963 (+) |
| LOC110496862 | LOC106588838 | other | upstream | 1771894 | 56028870 ~ 56504444 (+) |
| G1566445 | LOC106588893 | other | downstream | 417493 | 58364256 ~ 58377006 (+) |
| LOC110496618 | LOC106588914 | other | downstream | 924136 | 58864013 ~ 58873692 (+) |
| dlx5a | dlx5 | other | downstream | 1010358 | 58957121 ~ 58959671 (+) |
| sem1 | shfm1 | other | downstream | 1078217 | 59024919 ~ 59035388 (+) |
| G1567716 | asb4 | other | downstream | 1363221 | 59309984 ~ 59312723 (+) |
