G1566267


Basic Information

Item Value
gene id G1566267
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 57973404 ~ 57976373 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1791892
gagggccgaaatgcagcgtggtgattactcatgttctttaatcaataatagacgatacatgaaataactaaatgaatatgaaaacaacaaacggaacgtgaaacctaatacagcctatctggtgaacactacacaaagacaggaacaatcacccacaaacacacagtgaaacccaggctacctaaatatggttcccaatcagagacaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1791892 True 208 lncRNA 0.39 2 57973404 57976373

Neighbor

gene id symbol gene type direction distance location
LOC110496592 LOC106588883 coding upstream 38107 57893854 ~ 57935297 (+)
LOC110496591 LOC106588881 coding upstream 103043 57851179 ~ 57870361 (+)
oxnad1 oxnad1 coding upstream 212988 57744249 ~ 57760416 (+)
LOC110496589 galnt15 coding upstream 230717 57729944 ~ 57742687 (+)
LOC110496587 LOC106588873 coding upstream 278539 57657065 ~ 57694865 (+)
LOC110496868 LOC106588864 coding downstream 89111 58065484 ~ 58140619 (+)
LOC110496594 LOC106588886 coding downstream 206104 58182477 ~ 58187784 (+)
LOC110496595 LOC106588888 coding downstream 212419 58188792 ~ 58212558 (+)
LOC110496954 LOC106588892 coding downstream 349757 58326130 ~ 58338076 (+)
LOC118941193 NA coding downstream 402322 58378682 ~ 58383251 (+)
G1566194 NA non-coding upstream 88277 57821610 ~ 57885127 (+)
G1566217 NA non-coding upstream 123447 57846829 ~ 57849957 (+)
G1566158 LOC106570535 non-coding upstream 204268 57768386 ~ 57769136 (+)
G1566109 NA non-coding upstream 317910 57655273 ~ 57655494 (+)
G1566024 NA non-coding upstream 452537 57520038 ~ 57520867 (+)
G1566269 NA non-coding downstream 5226 57981599 ~ 57981812 (+)
G1566278 NA non-coding downstream 20602 57996975 ~ 57997466 (+)
G1566279 LOC106588885 non-coding downstream 22066 57998439 ~ 57999085 (+)
G1566281 NA non-coding downstream 22889 57999262 ~ 57999524 (+)
G1566280 LOC106588885 non-coding downstream 28827 58005200 ~ 58005835 (+)
G1566224 tbc1d5 other upstream 26641 57941097 ~ 57946763 (+)
LOC110496571 hoxa7aa other upstream 861441 57109128 ~ 57112335 (+)
G1565672 NA other upstream 941441 57031621 ~ 57031963 (+)
G1566445 LOC106588893 other downstream 387883 58364256 ~ 58377006 (+)
LOC110496618 LOC106588914 other downstream 894526 58864013 ~ 58873692 (+)
dlx5a dlx5 other downstream 980748 58957121 ~ 58959671 (+)
sem1 shfm1 other downstream 1048607 59024919 ~ 59035388 (+)
G1567716 asb4 other downstream 1333611 59309984 ~ 59312723 (+)

Expression


Co-expression Network