Gene
RNA
| Item | Value |
|---|---|
| gene id | G1566883 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 57994757 ~ 57995217 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| TC1-like transposase |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1792621 | True | 461 | lncRNA | 0.49 | 1 | 57994757 | 57995217 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496593 | tbc1d5 | coding | downstream | 28607 | 57939613 ~ 57966150 (-) |
| LOC110496952 | LOC106588868 | coding | downstream | 146396 | 57838719 ~ 57848361 (-) |
| dazl | dazl | coding | downstream | 163591 | 57822733 ~ 57831166 (-) |
| rftn1a | LOC106588880 | coding | downstream | 181866 | 57766500 ~ 57812891 (-) |
| LOC110496588 | LOC106588875 | coding | downstream | 279104 | 57699114 ~ 57715653 (-) |
| LOC110496867 | LOC106588885 | coding | upstream | 1710 | 57996927 ~ 58019631 (-) |
| sgo1 | LOC106588889 | coding | upstream | 218012 | 58213229 ~ 58223674 (-) |
| LOC110496870 | LOC106588890 | coding | upstream | 243253 | 58238470 ~ 58295781 (-) |
| LOC110496599 | LOC106588891 | coding | upstream | 307610 | 58302827 ~ 58306500 (-) |
| LOC110496600 | ubql4 | coding | upstream | 312157 | 58307374 ~ 58319520 (-) |
| G1566880 | NA | non-coding | downstream | 2110 | 57992375 ~ 57992647 (-) |
| G1566879 | NA | non-coding | downstream | 3068 | 57991350 ~ 57991689 (-) |
| G1566871 | NA | non-coding | downstream | 18235 | 57973405 ~ 57976522 (-) |
| G1566806 | NA | non-coding | downstream | 50157 | 57943657 ~ 57944600 (-) |
| G1566857 | NA | non-coding | downstream | 62853 | 57931021 ~ 57931904 (-) |
| G1566893 | NA | non-coding | upstream | 26199 | 58021416 ~ 58021624 (-) |
| G1566903 | NA | non-coding | upstream | 34899 | 58030116 ~ 58030412 (-) |
| G1566906 | NA | non-coding | upstream | 39604 | 58034821 ~ 58035090 (-) |
| G1566923 | NA | non-coding | upstream | 78992 | 58074209 ~ 58078146 (-) |
| LOC110496560 | LOC106588840 | other | downstream | 1257410 | 56728341 ~ 56737381 (-) |
| G1565122 | LOC106613431 | other | downstream | 1506468 | 56481468 ~ 56488289 (-) |
| G1563253 | NA | other | downstream | 3329114 | 54660626 ~ 54665643 (-) |
| LOC110496860 | LOC106588819 | other | downstream | 3341907 | 54636849 ~ 54652932 (-) |
| mrpl3 | mrpl3 | other | downstream | 4099808 | 53887137 ~ 53895002 (-) |
| G1566899 | NA | other | upstream | 32294 | 58027511 ~ 58027790 (-) |
| G1566972 | NA | other | upstream | 172167 | 58167384 ~ 58167697 (-) |
| G1567080 | NA | other | upstream | 415282 | 58410499 ~ 58411129 (-) |
| G1567875 | NA | other | upstream | 874146 | 58869363 ~ 58870007 (-) |
