Gene
RNA
| Item | Value |
|---|---|
| gene id | G1566282 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 58006013 ~ 58006590 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| DNA-binding protein SATB1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1791911 | True | 578 | lncRNA | 0.49 | 1 | 58006013 | 58006590 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496592 | LOC106588883 | coding | upstream | 70716 | 57893854 ~ 57935297 (+) |
| LOC110496591 | LOC106588881 | coding | upstream | 135652 | 57851179 ~ 57870361 (+) |
| oxnad1 | oxnad1 | coding | upstream | 245597 | 57744249 ~ 57760416 (+) |
| LOC110496589 | galnt15 | coding | upstream | 263326 | 57729944 ~ 57742687 (+) |
| LOC110496587 | LOC106588873 | coding | upstream | 311148 | 57657065 ~ 57694865 (+) |
| LOC110496868 | LOC106588864 | coding | downstream | 58894 | 58065484 ~ 58140619 (+) |
| LOC110496594 | LOC106588886 | coding | downstream | 175887 | 58182477 ~ 58187784 (+) |
| LOC110496595 | LOC106588888 | coding | downstream | 182202 | 58188792 ~ 58212558 (+) |
| LOC110496954 | LOC106588892 | coding | downstream | 319540 | 58326130 ~ 58338076 (+) |
| LOC118941193 | NA | coding | downstream | 372105 | 58378682 ~ 58383251 (+) |
| G1566280 | LOC106588885 | non-coding | upstream | 178 | 58005200 ~ 58005835 (+) |
| G1566281 | NA | non-coding | upstream | 6489 | 57999262 ~ 57999524 (+) |
| G1566279 | LOC106588885 | non-coding | upstream | 6928 | 57998439 ~ 57999085 (+) |
| G1566278 | NA | non-coding | upstream | 8547 | 57996975 ~ 57997466 (+) |
| G1566269 | NA | non-coding | upstream | 24201 | 57981599 ~ 57981812 (+) |
| G1566295 | NA | non-coding | downstream | 24391 | 58030981 ~ 58031285 (+) |
| G1566296 | NA | non-coding | downstream | 25037 | 58031627 ~ 58031854 (+) |
| G1566315 | NA | non-coding | downstream | 74799 | 58081389 ~ 58082864 (+) |
| G1566322 | NA | non-coding | downstream | 88095 | 58094685 ~ 58095426 (+) |
| G1566325 | NA | non-coding | downstream | 90198 | 58096788 ~ 58097478 (+) |
| G1566224 | tbc1d5 | other | upstream | 59250 | 57941097 ~ 57946763 (+) |
| LOC110496571 | hoxa7aa | other | upstream | 894050 | 57109128 ~ 57112335 (+) |
| G1565672 | NA | other | upstream | 974050 | 57031621 ~ 57031963 (+) |
| G1566445 | LOC106588893 | other | downstream | 357666 | 58364256 ~ 58377006 (+) |
| LOC110496618 | LOC106588914 | other | downstream | 864309 | 58864013 ~ 58873692 (+) |
| dlx5a | dlx5 | other | downstream | 950531 | 58957121 ~ 58959671 (+) |
| sem1 | shfm1 | other | downstream | 1018390 | 59024919 ~ 59035388 (+) |
| G1567716 | asb4 | other | downstream | 1303394 | 59309984 ~ 59312723 (+) |
