G1566349


Basic Information

Item Value
gene id G1566349
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58138979 ~ 58139211 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1791998
CTATAGGACCACTACTGGCTGGATAGGACTAATCACCTCCAAGCCATCATTTTAATGACCAATTAGACCAGCATCATCATGCTAGGCCAGAATAGCAACCCAAAATTGCTGGCTGGAAATGACCAAATTAATATTGATGACCCGGAATGGTTGAATGGCAGTTTCACTGAGGGTGGCAGATTAAGGCTACATCCAGATTTTCCACCcttctcccaaagtgtgcactttaACAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1791998 True 233 lncRNA 0.44 1 58138979 58139211

Neighbor

gene id symbol gene type direction distance location
LOC110496592 LOC106588883 coding upstream 203682 57893854 ~ 57935297 (+)
LOC110496591 LOC106588881 coding upstream 268618 57851179 ~ 57870361 (+)
oxnad1 oxnad1 coding upstream 378563 57744249 ~ 57760416 (+)
LOC110496589 galnt15 coding upstream 396292 57729944 ~ 57742687 (+)
LOC110496587 LOC106588873 coding upstream 444114 57657065 ~ 57694865 (+)
LOC110496594 LOC106588886 coding downstream 43266 58182477 ~ 58187784 (+)
LOC110496595 LOC106588888 coding downstream 49581 58188792 ~ 58212558 (+)
LOC110496954 LOC106588892 coding downstream 186919 58326130 ~ 58338076 (+)
LOC118941193 NA coding downstream 239484 58378682 ~ 58383251 (+)
LOC118941195 NA coding downstream 244104 58383315 ~ 58384050 (+)
G1566346 NA non-coding upstream 6543 58128765 ~ 58132436 (+)
G1566325 NA non-coding upstream 41501 58096788 ~ 58097478 (+)
G1566322 NA non-coding upstream 43553 58094685 ~ 58095426 (+)
G1566315 NA non-coding upstream 56115 58081389 ~ 58082864 (+)
G1566296 NA non-coding upstream 107125 58031627 ~ 58031854 (+)
G1566351 NA non-coding downstream 5078 58144289 ~ 58145241 (+)
G1566350 NA non-coding downstream 6164 58145375 ~ 58146325 (+)
G1566352 NA non-coding downstream 7579 58146790 ~ 58146995 (+)
G1566354 NA non-coding downstream 10801 58150012 ~ 58150237 (+)
G1566361 NA non-coding downstream 26645 58165856 ~ 58166064 (+)
G1566224 tbc1d5 other upstream 192216 57941097 ~ 57946763 (+)
LOC110496571 hoxa7aa other upstream 1027016 57109128 ~ 57112335 (+)
G1565672 NA other upstream 1107016 57031621 ~ 57031963 (+)
G1566445 LOC106588893 other downstream 225045 58364256 ~ 58377006 (+)
LOC110496618 LOC106588914 other downstream 731688 58864013 ~ 58873692 (+)
dlx5a dlx5 other downstream 817910 58957121 ~ 58959671 (+)
sem1 shfm1 other downstream 885769 59024919 ~ 59035388 (+)
G1567716 asb4 other downstream 1170773 59309984 ~ 59312723 (+)

Expression


Co-expression Network