G1566352


Basic Information

Item Value
gene id G1566352
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58146790 ~ 58146995 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1792002
ccactccgctttctattctggttggagccagtttgcgctgttctgtgaagggagcagtacacagcgctgtacgatatcttcagtttcttggcaattgccttcatttctcagaactagaatagactgatgagtttcagaagaaagtgctttgtttctggccattttgagcctgtaatcgaacccacaaatgctgatgctccagatac

Function

NR:

description
unnamed protein product

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1792002 True 206 lncRNA 0.45 1 58146790 58146995

Neighbor

gene id symbol gene type direction distance location
LOC110496868 LOC106588864 coding upstream 6171 58065484 ~ 58140619 (+)
LOC110496592 LOC106588883 coding upstream 211493 57893854 ~ 57935297 (+)
LOC110496591 LOC106588881 coding upstream 276429 57851179 ~ 57870361 (+)
oxnad1 oxnad1 coding upstream 386374 57744249 ~ 57760416 (+)
LOC110496589 galnt15 coding upstream 404103 57729944 ~ 57742687 (+)
LOC110496594 LOC106588886 coding downstream 35482 58182477 ~ 58187784 (+)
LOC110496595 LOC106588888 coding downstream 41797 58188792 ~ 58212558 (+)
LOC110496954 LOC106588892 coding downstream 179135 58326130 ~ 58338076 (+)
LOC118941193 NA coding downstream 231700 58378682 ~ 58383251 (+)
LOC118941195 NA coding downstream 236320 58383315 ~ 58384050 (+)
G1566350 NA non-coding upstream 465 58145375 ~ 58146325 (+)
G1566351 NA non-coding upstream 1549 58144289 ~ 58145241 (+)
G1566349 NA non-coding upstream 7579 58138979 ~ 58139211 (+)
G1566346 NA non-coding upstream 14354 58128765 ~ 58132436 (+)
G1566325 NA non-coding upstream 49312 58096788 ~ 58097478 (+)
G1566354 NA non-coding downstream 3017 58150012 ~ 58150237 (+)
G1566361 NA non-coding downstream 18861 58165856 ~ 58166064 (+)
G1566362 NA non-coding downstream 20001 58166996 ~ 58167203 (+)
G1566416 NA non-coding downstream 160182 58307177 ~ 58308879 (+)
G1566439 NA non-coding downstream 195445 58342440 ~ 58342708 (+)
G1566224 tbc1d5 other upstream 200027 57941097 ~ 57946763 (+)
LOC110496571 hoxa7aa other upstream 1034827 57109128 ~ 57112335 (+)
G1565672 NA other upstream 1114827 57031621 ~ 57031963 (+)
G1566445 LOC106588893 other downstream 217261 58364256 ~ 58377006 (+)
LOC110496618 LOC106588914 other downstream 723904 58864013 ~ 58873692 (+)
dlx5a dlx5 other downstream 810126 58957121 ~ 58959671 (+)
sem1 shfm1 other downstream 877985 59024919 ~ 59035388 (+)
G1567716 asb4 other downstream 1162989 59309984 ~ 59312723 (+)

Expression


Co-expression Network