Gene
RNA
| Item | Value |
|---|---|
| gene id | G1566354 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 58150012 ~ 58150237 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1792004 | True | 226 | lncRNA | 0.50 | 1 | 58150012 | 58150237 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496868 | LOC106588864 | coding | upstream | 9393 | 58065484 ~ 58140619 (+) |
| LOC110496592 | LOC106588883 | coding | upstream | 214715 | 57893854 ~ 57935297 (+) |
| LOC110496591 | LOC106588881 | coding | upstream | 279651 | 57851179 ~ 57870361 (+) |
| oxnad1 | oxnad1 | coding | upstream | 389596 | 57744249 ~ 57760416 (+) |
| LOC110496589 | galnt15 | coding | upstream | 407325 | 57729944 ~ 57742687 (+) |
| LOC110496594 | LOC106588886 | coding | downstream | 32240 | 58182477 ~ 58187784 (+) |
| LOC110496595 | LOC106588888 | coding | downstream | 38555 | 58188792 ~ 58212558 (+) |
| LOC110496954 | LOC106588892 | coding | downstream | 175893 | 58326130 ~ 58338076 (+) |
| LOC118941193 | NA | coding | downstream | 228458 | 58378682 ~ 58383251 (+) |
| LOC118941195 | NA | coding | downstream | 233078 | 58383315 ~ 58384050 (+) |
| G1566352 | NA | non-coding | upstream | 3017 | 58146790 ~ 58146995 (+) |
| G1566350 | NA | non-coding | upstream | 3687 | 58145375 ~ 58146325 (+) |
| G1566351 | NA | non-coding | upstream | 4771 | 58144289 ~ 58145241 (+) |
| G1566349 | NA | non-coding | upstream | 10801 | 58138979 ~ 58139211 (+) |
| G1566346 | NA | non-coding | upstream | 17576 | 58128765 ~ 58132436 (+) |
| G1566361 | NA | non-coding | downstream | 15619 | 58165856 ~ 58166064 (+) |
| G1566362 | NA | non-coding | downstream | 16759 | 58166996 ~ 58167203 (+) |
| G1566416 | NA | non-coding | downstream | 156940 | 58307177 ~ 58308879 (+) |
| G1566439 | NA | non-coding | downstream | 192203 | 58342440 ~ 58342708 (+) |
| G1566440 | NA | non-coding | downstream | 193419 | 58343656 ~ 58343941 (+) |
| G1566224 | tbc1d5 | other | upstream | 203249 | 57941097 ~ 57946763 (+) |
| LOC110496571 | hoxa7aa | other | upstream | 1038049 | 57109128 ~ 57112335 (+) |
| G1565672 | NA | other | upstream | 1118049 | 57031621 ~ 57031963 (+) |
| G1566445 | LOC106588893 | other | downstream | 214019 | 58364256 ~ 58377006 (+) |
| LOC110496618 | LOC106588914 | other | downstream | 720662 | 58864013 ~ 58873692 (+) |
| dlx5a | dlx5 | other | downstream | 806884 | 58957121 ~ 58959671 (+) |
| sem1 | shfm1 | other | downstream | 874743 | 59024919 ~ 59035388 (+) |
| G1567716 | asb4 | other | downstream | 1159747 | 59309984 ~ 59312723 (+) |
