G1566361


Basic Information

Item Value
gene id G1566361
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58165856 ~ 58166064 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1792011
gtacagtacatacacttaaatgtacagtacatacacttAAATGTGAATTGAACCATGTCAAAGACACCCATATAATGTTTGCCAGAgttgtgtctctctcactctgattTAAAAACTCTGTATAcagctaaccaaggttgccaggtgcacagtgtttcctccgacacattggtgcggctggcttccgggttgtatgcacgctgtgttaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1792011 True 209 lncRNA 0.43 1 58165856 58166064

Neighbor

gene id symbol gene type direction distance location
LOC110496868 LOC106588864 coding upstream 25237 58065484 ~ 58140619 (+)
LOC110496592 LOC106588883 coding upstream 230559 57893854 ~ 57935297 (+)
LOC110496591 LOC106588881 coding upstream 295495 57851179 ~ 57870361 (+)
oxnad1 oxnad1 coding upstream 405440 57744249 ~ 57760416 (+)
LOC110496589 galnt15 coding upstream 423169 57729944 ~ 57742687 (+)
LOC110496594 LOC106588886 coding downstream 16413 58182477 ~ 58187784 (+)
LOC110496595 LOC106588888 coding downstream 22728 58188792 ~ 58212558 (+)
LOC110496954 LOC106588892 coding downstream 160066 58326130 ~ 58338076 (+)
LOC118941193 NA coding downstream 212631 58378682 ~ 58383251 (+)
LOC118941195 NA coding downstream 217251 58383315 ~ 58384050 (+)
G1566354 NA non-coding upstream 15619 58150012 ~ 58150237 (+)
G1566352 NA non-coding upstream 18861 58146790 ~ 58146995 (+)
G1566350 NA non-coding upstream 19531 58145375 ~ 58146325 (+)
G1566351 NA non-coding upstream 20615 58144289 ~ 58145241 (+)
G1566349 NA non-coding upstream 26645 58138979 ~ 58139211 (+)
G1566362 NA non-coding downstream 932 58166996 ~ 58167203 (+)
G1566416 NA non-coding downstream 141113 58307177 ~ 58308879 (+)
G1566439 NA non-coding downstream 176376 58342440 ~ 58342708 (+)
G1566440 NA non-coding downstream 177592 58343656 ~ 58343941 (+)
G1566443 NA non-coding downstream 183466 58349530 ~ 58352481 (+)
G1566224 tbc1d5 other upstream 219093 57941097 ~ 57946763 (+)
LOC110496571 hoxa7aa other upstream 1053893 57109128 ~ 57112335 (+)
G1565672 NA other upstream 1133893 57031621 ~ 57031963 (+)
G1566445 LOC106588893 other downstream 198192 58364256 ~ 58377006 (+)
LOC110496618 LOC106588914 other downstream 704835 58864013 ~ 58873692 (+)
dlx5a dlx5 other downstream 791057 58957121 ~ 58959671 (+)
sem1 shfm1 other downstream 858916 59024919 ~ 59035388 (+)
G1567716 asb4 other downstream 1143920 59309984 ~ 59312723 (+)

Expression


Co-expression Network