Gene
RNA
| Item | Value |
|---|---|
| gene id | G1567348 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 58577525 ~ 58577752 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: chromo domain-containing protein cec-1-like |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1793190 | True | 228 | lncRNA | 0.64 | 1 | 58577525 | 58577752 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496602 | LOC106588895 | coding | downstream | 4373 | 58443648 ~ 58573152 (-) |
| LOC110496601 | LOC106588893 | coding | downstream | 164590 | 58349527 ~ 58412935 (-) |
| LOC110496600 | ubql4 | coding | downstream | 258005 | 58307374 ~ 58319520 (-) |
| LOC110496599 | LOC106588891 | coding | downstream | 271025 | 58302827 ~ 58306500 (-) |
| LOC110496870 | LOC106588890 | coding | downstream | 281744 | 58238470 ~ 58295781 (-) |
| LOC110496603 | NA | coding | upstream | 11343 | 58589095 ~ 58609677 (-) |
| si:ch211-13c6.2 | LOC106588899 | coding | upstream | 51564 | 58629316 ~ 58640812 (-) |
| LOC110496605 | LOC106588900 | coding | upstream | 63281 | 58641033 ~ 58661466 (-) |
| LOC110496608 | LOC106588904 | coding | upstream | 98465 | 58676217 ~ 58708019 (-) |
| LOC110496607 | LOC106588901 | coding | upstream | 130494 | 58708246 ~ 58723758 (-) |
| G1567334 | NA | non-coding | downstream | 22143 | 58553305 ~ 58555382 (-) |
| G1567326 | NA | non-coding | downstream | 40657 | 58533763 ~ 58536868 (-) |
| G1567288 | NA | non-coding | downstream | 110088 | 58466682 ~ 58467437 (-) |
| G1567068 | NA | non-coding | downstream | 217302 | 58359531 ~ 58360223 (-) |
| G1566997 | NA | non-coding | downstream | 364996 | 58210670 ~ 58212529 (-) |
| G1567355 | NA | non-coding | upstream | 6074 | 58583826 ~ 58584056 (-) |
| G1567353 | NA | non-coding | upstream | 10608 | 58588360 ~ 58588982 (-) |
| G1567368 | NA | non-coding | upstream | 84861 | 58662613 ~ 58662887 (-) |
| G1567380 | NA | non-coding | upstream | 116220 | 58693972 ~ 58694822 (-) |
| LOC110496609 | cap2 | non-coding | upstream | 162013 | 58739765 ~ 58789014 (-) |
| G1567080 | NA | other | downstream | 166396 | 58410499 ~ 58411129 (-) |
| G1566972 | NA | other | downstream | 409828 | 58167384 ~ 58167697 (-) |
| G1566923 | NA | other | downstream | 499379 | 58074209 ~ 58078146 (-) |
| G1566899 | NA | other | downstream | 549735 | 58027511 ~ 58027790 (-) |
| LOC110496560 | LOC106588840 | other | downstream | 1840178 | 56728341 ~ 56737381 (-) |
| G1567875 | NA | other | upstream | 291611 | 58869363 ~ 58870007 (-) |
| G1567871 | LOC106588914 | other | upstream | 293185 | 58870937 ~ 58873691 (-) |
| G1567931 | NA | other | upstream | 427093 | 59004845 ~ 59074648 (-) |
| G1568017 | NA | other | upstream | 577276 | 59155028 ~ 59157044 (-) |
| LOC110496637 | gng11 | other | upstream | 1151427 | 59712624 ~ 59738593 (-) |
