G1567178


Basic Information

Item Value
gene id G1567178
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58577834 ~ 58578151 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1792994
tcaccggtcttcaagccatcattgatccatttgtcattttccattggtcttgtcttgttttcctacacacctggttccaatcccattcattacatgttgtgtatttaacctctgtttcccctcatgtcctggtcagagattgtttgttttgtatgtttgtgtattatgtattagtGCGCGACGGGTTCTTGTACCCACTTTTATTTATGTTGTATTTTTGATTATGGAGTTTTGTCAAGTCTATTAAACGACACcatttataccaagttcgattctcctgtgcctgacttccttACCACCTATACACACAACATTACA

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1792994 True 318 lncRNA 0.38 1 58577834 58578151

Neighbor

gene id symbol gene type direction distance location
LOC118941194 NA coding upstream 191870 58379624 ~ 58386065 (+)
LOC118941196 NA coding upstream 193183 58384103 ~ 58384651 (+)
LOC118941195 NA coding upstream 193784 58383315 ~ 58384050 (+)
LOC118941193 NA coding upstream 194583 58378682 ~ 58383251 (+)
LOC110496954 LOC106588892 coding upstream 239758 58326130 ~ 58338076 (+)
LOC110496610 aunip coding downstream 159198 58737349 ~ 58739567 (+)
nanos2 LOC106588910 coding downstream 245051 58823202 ~ 58823929 (+)
LOC110496618 LOC106588914 coding downstream 285862 58864013 ~ 58873692 (+)
LOC110496619 catsper4 coding downstream 328354 58906505 ~ 58915399 (+)
chrc1 chrc1 coding downstream 340168 58918319 ~ 58922019 (+)
G1567160 NA non-coding upstream 28683 58546084 ~ 58549151 (+)
G1567083 NA non-coding upstream 110279 58466906 ~ 58467555 (+)
G1567095 NA non-coding upstream 132821 58441902 ~ 58445013 (+)
G1567094 NA non-coding upstream 139377 58437717 ~ 58438457 (+)
G1567184 NA non-coding downstream 4047 58582198 ~ 58582420 (+)
G1567187 NA non-coding downstream 18880 58597031 ~ 58597466 (+)
G1567224 NA non-coding downstream 93293 58671444 ~ 58671736 (+)
G1567225 NA non-coding downstream 93661 58671812 ~ 58672080 (+)
G1567196 NA non-coding downstream 98072 58676223 ~ 58701978 (+)
G1566445 LOC106588893 other upstream 200828 58364256 ~ 58377006 (+)
G1566224 tbc1d5 other upstream 631071 57941097 ~ 57946763 (+)
LOC110496592 LOC106588883 other upstream 657188 57893854 ~ 57935297 (+)
LOC110496591 LOC106588881 other upstream 714788 57851179 ~ 57870361 (+)
LOC110496571 hoxa7aa other upstream 1465871 57109128 ~ 57112335 (+)
dlx5a dlx5 other downstream 378970 58957121 ~ 58959671 (+)
sem1 shfm1 other downstream 446829 59024919 ~ 59035388 (+)
G1567716 asb4 other downstream 731833 59309984 ~ 59312723 (+)
G1567804 col1a2 other downstream 923022 59501173 ~ 59585317 (+)

Expression


Co-expression Network