G1567353


Basic Information

Item Value
gene id G1567353
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58588360 ~ 58588982 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1793210
GTACAACAGGCACTGTTCTTTAGCAAAGCAATTTCACGTACTGTATAGCcattttgggtacttcagataaTTACAGACATCTGTGATAATCTACGGATTTCTGTGCGGCCTTATCACATAGAATATATCAAATAATTAAATAAGATCATTTTAAaataacaatagaataacaaAGCTTTAAAatattatcctaaatataaaccatcaatggaatggagccaatggaatggcatcaaacgcatggaaaccatgtgtttgatgtatttgataccattccactcattctgctccagccattgcACATCTATTTGACTGAAGTCAATAATTGTAAGAGTTGCCgtgttaattgaaaataatgccattgttgatcaTTTTTTCATACATTTTGGTATTTTCTCCTGAACCATATGGtatatccactagaaactcatggacacaGATTTCAAAAATGAATACTATATTAATATATTTTACTAATGTTGCCATAGGTTATCTGTTTATTACCAAAATGACAGAAGATTCTGGTAATTTTGTTAGATTACCAGTAGTTTAGCAACCCTAAATGTAAGTGCTCTATGGCCACACAGTAGGTGTCTTAAATTTTCACCCTCTTGAATTTCTTC

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1793210 True 623 lncRNA 0.33 1 58588360 58588982

Neighbor

gene id symbol gene type direction distance location
LOC110496602 LOC106588895 coding downstream 15208 58443648 ~ 58573152 (-)
LOC110496601 LOC106588893 coding downstream 175425 58349527 ~ 58412935 (-)
LOC110496600 ubql4 coding downstream 268840 58307374 ~ 58319520 (-)
LOC110496599 LOC106588891 coding downstream 281860 58302827 ~ 58306500 (-)
LOC110496870 LOC106588890 coding downstream 292579 58238470 ~ 58295781 (-)
LOC110496603 NA coding upstream 113 58589095 ~ 58609677 (-)
si:ch211-13c6.2 LOC106588899 coding upstream 40334 58629316 ~ 58640812 (-)
LOC110496605 LOC106588900 coding upstream 52051 58641033 ~ 58661466 (-)
LOC110496608 LOC106588904 coding upstream 87235 58676217 ~ 58708019 (-)
LOC110496607 LOC106588901 coding upstream 119264 58708246 ~ 58723758 (-)
G1567355 NA non-coding downstream 4304 58583826 ~ 58584056 (-)
G1567348 NA non-coding downstream 10608 58577525 ~ 58577752 (-)
G1567334 NA non-coding downstream 32978 58553305 ~ 58555382 (-)
G1567326 NA non-coding downstream 51492 58533763 ~ 58536868 (-)
G1567288 NA non-coding downstream 120923 58466682 ~ 58467437 (-)
G1567368 NA non-coding upstream 73631 58662613 ~ 58662887 (-)
G1567380 NA non-coding upstream 104990 58693972 ~ 58694822 (-)
LOC110496609 cap2 non-coding upstream 150783 58739765 ~ 58789014 (-)
G1567865 NA non-coding upstream 233197 58822179 ~ 58822505 (-)
G1567871 LOC106588914 non-coding upstream 282874 58870937 ~ 58873691 (-)
G1567080 NA other downstream 177231 58410499 ~ 58411129 (-)
G1566972 NA other downstream 420663 58167384 ~ 58167697 (-)
G1566923 NA other downstream 510214 58074209 ~ 58078146 (-)
G1566899 NA other downstream 560570 58027511 ~ 58027790 (-)
LOC110496560 LOC106588840 other downstream 1851013 56728341 ~ 56737381 (-)
G1567875 NA other upstream 280381 58869363 ~ 58870007 (-)
G1567931 NA other upstream 415863 59004845 ~ 59074648 (-)
G1568017 NA other upstream 566046 59155028 ~ 59157044 (-)
LOC110496637 gng11 other upstream 1140197 59712624 ~ 59738593 (-)

Expression


Co-expression Network