Gene
RNA
| Item | Value |
|---|---|
| gene id | G1567187 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 58597031 ~ 58597466 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1793003 | True | 374 | lncRNA | 0.46 | 3 | 58597031 | 58597466 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941194 | NA | coding | upstream | 211067 | 58379624 ~ 58386065 (+) |
| LOC118941196 | NA | coding | upstream | 212380 | 58384103 ~ 58384651 (+) |
| LOC118941195 | NA | coding | upstream | 212981 | 58383315 ~ 58384050 (+) |
| LOC118941193 | NA | coding | upstream | 213780 | 58378682 ~ 58383251 (+) |
| LOC110496954 | LOC106588892 | coding | upstream | 258955 | 58326130 ~ 58338076 (+) |
| LOC110496610 | aunip | coding | downstream | 139883 | 58737349 ~ 58739567 (+) |
| nanos2 | LOC106588910 | coding | downstream | 225736 | 58823202 ~ 58823929 (+) |
| LOC110496618 | LOC106588914 | coding | downstream | 266547 | 58864013 ~ 58873692 (+) |
| LOC110496619 | catsper4 | coding | downstream | 309039 | 58906505 ~ 58915399 (+) |
| chrc1 | chrc1 | coding | downstream | 320853 | 58918319 ~ 58922019 (+) |
| G1567184 | NA | non-coding | upstream | 14611 | 58582198 ~ 58582420 (+) |
| G1567178 | NA | non-coding | upstream | 18880 | 58577834 ~ 58578151 (+) |
| G1567160 | NA | non-coding | upstream | 47880 | 58546084 ~ 58549151 (+) |
| G1567083 | NA | non-coding | upstream | 129476 | 58466906 ~ 58467555 (+) |
| G1567095 | NA | non-coding | upstream | 152018 | 58441902 ~ 58445013 (+) |
| G1567224 | NA | non-coding | downstream | 73978 | 58671444 ~ 58671736 (+) |
| G1567225 | NA | non-coding | downstream | 74346 | 58671812 ~ 58672080 (+) |
| G1567196 | NA | non-coding | downstream | 78757 | 58676223 ~ 58701978 (+) |
| G1567231 | NA | non-coding | downstream | 85795 | 58683261 ~ 58683571 (+) |
| G1567233 | NA | non-coding | downstream | 87349 | 58684815 ~ 58707960 (+) |
| G1566445 | LOC106588893 | other | upstream | 220025 | 58364256 ~ 58377006 (+) |
| G1566224 | tbc1d5 | other | upstream | 650268 | 57941097 ~ 57946763 (+) |
| LOC110496592 | LOC106588883 | other | upstream | 676385 | 57893854 ~ 57935297 (+) |
| LOC110496591 | LOC106588881 | other | upstream | 733985 | 57851179 ~ 57870361 (+) |
| LOC110496571 | hoxa7aa | other | upstream | 1485068 | 57109128 ~ 57112335 (+) |
| dlx5a | dlx5 | other | downstream | 359655 | 58957121 ~ 58959671 (+) |
| sem1 | shfm1 | other | downstream | 427514 | 59024919 ~ 59035388 (+) |
| G1567716 | asb4 | other | downstream | 712518 | 59309984 ~ 59312723 (+) |
| G1567804 | col1a2 | other | downstream | 903707 | 59501173 ~ 59585317 (+) |
