Gene
RNA
| Item | Value |
|---|---|
| gene id | G1567394 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 58731680 ~ 58732323 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| PREDICTED: histone-lysine N-methyltransferase 2B-like isoform X3 |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1793254 | True | 448 | lncRNA | 0.54 | 2 | 58731680 | 58732323 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC118941194 | NA | coding | upstream | 345716 | 58379624 ~ 58386065 (+) |
| LOC118941196 | NA | coding | upstream | 347029 | 58384103 ~ 58384651 (+) |
| LOC118941195 | NA | coding | upstream | 347630 | 58383315 ~ 58384050 (+) |
| LOC118941193 | NA | coding | upstream | 348429 | 58378682 ~ 58383251 (+) |
| LOC110496954 | LOC106588892 | coding | upstream | 393604 | 58326130 ~ 58338076 (+) |
| LOC110496610 | aunip | coding | downstream | 5026 | 58737349 ~ 58739567 (+) |
| nanos2 | LOC106588910 | coding | downstream | 90879 | 58823202 ~ 58823929 (+) |
| LOC110496618 | LOC106588914 | coding | downstream | 131690 | 58864013 ~ 58873692 (+) |
| LOC110496619 | catsper4 | coding | downstream | 174182 | 58906505 ~ 58915399 (+) |
| chrc1 | chrc1 | coding | downstream | 185996 | 58918319 ~ 58922019 (+) |
| G1567388 | NA | non-coding | upstream | 7255 | 58724215 ~ 58724425 (+) |
| G1567233 | NA | non-coding | upstream | 23720 | 58684815 ~ 58707960 (+) |
| G1567196 | NA | non-coding | upstream | 29702 | 58676223 ~ 58701978 (+) |
| G1567231 | NA | non-coding | upstream | 48109 | 58683261 ~ 58683571 (+) |
| G1567225 | NA | non-coding | upstream | 59600 | 58671812 ~ 58672080 (+) |
| G1567397 | NA | non-coding | downstream | 7423 | 58739746 ~ 58741845 (+) |
| G1567475 | NA | non-coding | downstream | 88913 | 58821236 ~ 58821556 (+) |
| G1567515 | NA | non-coding | downstream | 137158 | 58869481 ~ 58870010 (+) |
| G1567516 | NA | non-coding | downstream | 144704 | 58877027 ~ 58877460 (+) |
| G1567522 | NA | non-coding | downstream | 158080 | 58890403 ~ 58902491 (+) |
| G1566445 | LOC106588893 | other | upstream | 354674 | 58364256 ~ 58377006 (+) |
| G1566224 | tbc1d5 | other | upstream | 784917 | 57941097 ~ 57946763 (+) |
| LOC110496592 | LOC106588883 | other | upstream | 811034 | 57893854 ~ 57935297 (+) |
| LOC110496591 | LOC106588881 | other | upstream | 868634 | 57851179 ~ 57870361 (+) |
| LOC110496571 | hoxa7aa | other | upstream | 1619717 | 57109128 ~ 57112335 (+) |
| dlx5a | dlx5 | other | downstream | 224798 | 58957121 ~ 58959671 (+) |
| sem1 | shfm1 | other | downstream | 292657 | 59024919 ~ 59035388 (+) |
| G1567716 | asb4 | other | downstream | 577661 | 59309984 ~ 59312723 (+) |
| G1567804 | col1a2 | other | downstream | 768850 | 59501173 ~ 59585317 (+) |
