G1567397


Basic Information

Item Value
gene id G1567397
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58739746 ~ 58741845 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1793257
TGCTTAATTTAAGGTTACAGTGGTGTATTCAGACTAACAGGTATGCATATTGACAATAGTTCAGTAGACATTGAACATTATGAAAAACATTTCTCTATCTTGATTTGTATCTAAGCATATTAAGGCTTATGCAGTGCTGGTGACAGCAATCTATTGGTGATGCTACAACCATATATTTGGGTTAGGAAAAGTAATAAGATAACTAGTTTAAGATATATCTTGCTATTATCTTTCACTTTGTCAATTAAGTCTGCTGTCAATGCACTATAggctagtatatatatatatttaaacgtGTTTTTAAAAACCCACTCCACTCCCAATTCAGTGCTACCCCAGCTAGCACAAAGTTCTGAGAACCATTAGTTTGTTAAAGCTTGGCTTTAAACACTTGGAGTGTTGTTGCCCTacggttattttgcatacaaccttctaGGAATGGAGCAGGATACCCAGCTCACACATTTTTTGAGAGCTATATGTTTCTGTGGTGGGAAATGTAGTACTTtcagctccatcctggtggcgtaGTGGAATAATTCCATGGATAAAGAAGAGAAGATAATAGTTTTGAATTTCACTGACGCCATAccacaataaaaaaatacaattgtatGATTAATGCCGAAGCAAATACATTTGAATTTGTTCTGTGTTTGGAGTTCAAACCAGTTAAACTAAGCTAGCGGTGTTATTagaagtcttattgaaacatgttctcagaacattatttaattaccttcaaattACATTACCATTCTCAGAACATTAATAAAACCTttccaggaaaactttcagggaaccatagtaaaatgttctcagaacctcactgcaacctaaaaatgtaaGTTCCCAGAACAGGCAACATTTTTACTTCCGTTCACAGaatgttacaaaaaaaaaatcagttcTACTGGTCAGGAAACTTATGGCTTCCTTCCCAGAAATGTGGAATCAAAAACATACgctcccacaacttccaaggaaccaaatgtgctagctgggagaaCACTAGCATGCAGTATAAACATGATACAACTGTTAACTGAACAGCTAGATGTGAATAGTTTAGTATCGCAGAGTATTAAAGCAAACCAAAACAGTATATGCTTCAGCATCTTGTGGAACATACTCTACAACTCCCTCTCAACTGACCATATAGTTTCAAACTGGCCATTCAATTTTATCCGTGGAACATTCTCTTCATCCTACATATCATACAAATCAAAAGTCAACTCGACCTCATTCTTCAATACTTTCTGCCTCTCAAATCAAGTCACAACAAAGCATAAAGCataaaacaacaacattacaaTGCCAGTATGGAATCTGAAGGTTCTCTTCAATCAAAAGACACATCCATAATATATCCTAATACAAGGTTTGCCTTATCAGGGTAGGTCTTTCAGCTGTTAACTTGTAAAGAAGTAATTATGTTGTACACATAGCCTACTTGCATAAACACCTTTTATGTTATGGCACACACAAGTAAGTGCCAGATACTTGTTTGAGAGTCTTTACCTTATTTTGCATAAACAGATTTAACAGATTAACATAAAGGCTACACTTCCTCACTATTCCTCATTTTAATGCAACTTTATTTGCCAAACACAGAAGTTCTACACGAAGAAACCTGACAAAAATACTGCATGTTTAAATAGTAAGCTTACCATAACTCTGTGGATAGTACAGTAGTTTTGTGAAGGAGAGTGCTCTGCAACAAATAAGCTGAACAAACAGTTCAAGGACAATCTACAATTTCAAAGTGCAGAGGAAACAATATAATGTAATCTTAATGCATACAATCAGGCGTACAATCAACTGACCTACAGCACTACTAGCCAGTCAGTTACACTGTCTGGTTTGTGTGGTACAGGATCCCTTTTATTACCAGCCTATAAGGTTTGTGAAACCTCTGACGGAGAGGGAAAATAGATGAGGAATAAATGGGGGTGATAAGAGATCATCTCGATGAGGAGGAAGTATCAGCAATCAGCCAGCGATCTCTGTGGGTTCTGTCACCAGTTTGGACCCGTCCCAAACGGTCTTGAACTGCTCAGGAACTGGGAACTCCC

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1793257 True 2075 lncRNA 0.37 2 58739746 58741845

Neighbor

gene id symbol gene type direction distance location
LOC110496610 aunip coding upstream 179 58737349 ~ 58739567 (+)
LOC118941194 NA coding upstream 353782 58379624 ~ 58386065 (+)
LOC118941196 NA coding upstream 355095 58384103 ~ 58384651 (+)
LOC118941195 NA coding upstream 355696 58383315 ~ 58384050 (+)
LOC118941193 NA coding upstream 356495 58378682 ~ 58383251 (+)
nanos2 LOC106588910 coding downstream 81357 58823202 ~ 58823929 (+)
LOC110496618 LOC106588914 coding downstream 122168 58864013 ~ 58873692 (+)
LOC110496619 catsper4 coding downstream 164660 58906505 ~ 58915399 (+)
chrc1 chrc1 coding downstream 176474 58918319 ~ 58922019 (+)
trnaa-ugc-140 NA coding downstream 203416 58945261 ~ 58945334 (+)
G1567394 NA non-coding upstream 7423 58731680 ~ 58732323 (+)
G1567388 NA non-coding upstream 15321 58724215 ~ 58724425 (+)
G1567233 NA non-coding upstream 31786 58684815 ~ 58707960 (+)
G1567196 NA non-coding upstream 37768 58676223 ~ 58701978 (+)
G1567231 NA non-coding upstream 56175 58683261 ~ 58683571 (+)
G1567475 NA non-coding downstream 79391 58821236 ~ 58821556 (+)
G1567515 NA non-coding downstream 127636 58869481 ~ 58870010 (+)
G1567516 NA non-coding downstream 135182 58877027 ~ 58877460 (+)
G1567522 NA non-coding downstream 148558 58890403 ~ 58902491 (+)
G1567505 LOC106588919 non-coding downstream 182456 58924301 ~ 58925552 (+)
G1566445 LOC106588893 other upstream 362740 58364256 ~ 58377006 (+)
G1566224 tbc1d5 other upstream 792983 57941097 ~ 57946763 (+)
LOC110496592 LOC106588883 other upstream 819100 57893854 ~ 57935297 (+)
LOC110496591 LOC106588881 other upstream 876700 57851179 ~ 57870361 (+)
LOC110496571 hoxa7aa other upstream 1627783 57109128 ~ 57112335 (+)
dlx5a dlx5 other downstream 215276 58957121 ~ 58959671 (+)
sem1 shfm1 other downstream 283135 59024919 ~ 59035388 (+)
G1567716 asb4 other downstream 568139 59309984 ~ 59312723 (+)
G1567804 col1a2 other downstream 759328 59501173 ~ 59585317 (+)

Expression


Co-expression Network