G1567475


Basic Information

Item Value
gene id G1567475
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58821236 ~ 58821556 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1793355
tggagagcatttgtgaacagcagttttcagttctttccacagattctcgattggattcaggtctggactttgacttggccattctaacacctggatatgtttatttttgaaccattccattgtagattttgctttatgttttggatcattgtcttgttggaagacacatcttcgtcccagtctcaggtcttttgcagactccatcaggttctcttccagaatggtcctgtatttggctccatccatcttcccatcaattttaaccatcttccctgtccctgctgaagaaaagcaggcccaaaccatgatgctgccaccacc

Function

NR:

description
Tc1-like transporase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1793355 True 321 lncRNA 0.44 1 58821236 58821556

Neighbor

gene id symbol gene type direction distance location
LOC110496610 aunip coding upstream 81669 58737349 ~ 58739567 (+)
LOC118941194 NA coding upstream 435272 58379624 ~ 58386065 (+)
LOC118941196 NA coding upstream 436585 58384103 ~ 58384651 (+)
LOC118941195 NA coding upstream 437186 58383315 ~ 58384050 (+)
LOC118941193 NA coding upstream 437985 58378682 ~ 58383251 (+)
nanos2 LOC106588910 coding downstream 1646 58823202 ~ 58823929 (+)
LOC110496618 LOC106588914 coding downstream 42457 58864013 ~ 58873692 (+)
LOC110496619 catsper4 coding downstream 84949 58906505 ~ 58915399 (+)
chrc1 chrc1 coding downstream 96763 58918319 ~ 58922019 (+)
trnaa-ugc-140 NA coding downstream 123705 58945261 ~ 58945334 (+)
G1567397 NA non-coding upstream 79391 58739746 ~ 58741845 (+)
G1567394 NA non-coding upstream 88913 58731680 ~ 58732323 (+)
G1567388 NA non-coding upstream 96811 58724215 ~ 58724425 (+)
G1567233 NA non-coding upstream 113276 58684815 ~ 58707960 (+)
G1567196 NA non-coding upstream 119258 58676223 ~ 58701978 (+)
G1567515 NA non-coding downstream 47925 58869481 ~ 58870010 (+)
G1567516 NA non-coding downstream 55471 58877027 ~ 58877460 (+)
G1567522 NA non-coding downstream 68847 58890403 ~ 58902491 (+)
G1567505 LOC106588919 non-coding downstream 102745 58924301 ~ 58925552 (+)
G1567503 NA non-coding downstream 108017 58929573 ~ 58930215 (+)
G1566445 LOC106588893 other upstream 444230 58364256 ~ 58377006 (+)
G1566224 tbc1d5 other upstream 874473 57941097 ~ 57946763 (+)
LOC110496592 LOC106588883 other upstream 900590 57893854 ~ 57935297 (+)
LOC110496591 LOC106588881 other upstream 958190 57851179 ~ 57870361 (+)
LOC110496571 hoxa7aa other upstream 1709273 57109128 ~ 57112335 (+)
dlx5a dlx5 other downstream 135565 58957121 ~ 58959671 (+)
sem1 shfm1 other downstream 203424 59024919 ~ 59035388 (+)
G1567716 asb4 other downstream 488428 59309984 ~ 59312723 (+)
G1567804 col1a2 other downstream 679617 59501173 ~ 59585317 (+)

Expression


Co-expression Network