G1567871 (LOC106588914)


Basic Information

Item Value
gene id G1567871
gene name LOC106588914
gene type misc
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58870937 ~ 58873691 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1793867
CTTTtgcaaaaatgtacatttttaatAAGCAGTCTTCCCATAGGGTAAACTTGATTTTAAACATTACAACAGAGGACAACAATGAACCAGACCAAAGAGAAAGAACAGCAGCCCTCCAGATTCATCTCATTTCTTCGACCACTCCTCAACCTCTTTCCTCTCACGGATGACCTCTTCCAGGTAAGGCTCCAGGTAATGTACATCCTCCTCATATTGAGTCCACTGTTCCTTAGGCAGAACTGCCTGCTTCATGGACAGGTCCAGGGCTCTCTTGAGCCTGAACATCCTGTCATTGTACACTTTCTCTGGGAGCCTCCGCAGGGCTTCTTTCACATCGCCATCCTCATGGATCGTGTCATCACGCATCAGACCAATTTTGTTGAATCCGGCCGCATTGTAGTACCATTTACGGAAGCCGACCAGGAGTCTGCCGGTAGCTGCTGGTGCCCTCGACCCCATGTTGTTCTGTCTAAGGTAAAACGAATCCGCGTCTCGTCA
>TU1793863
ccaggcaagctcaatcaaacaCAGAGAAAGTAAATTATATTTCAAATGGCATTTGAGCCCAGGTCTTCCATACCTCCTCATATTGAGTCCACTGTTCCTTAGGCAGAACTGCCTGCTTCATGGACAGGTCCAGGGCTCTCTTGAGCCTGAACATCCTGTCATTGTACACTTTCTCTGGGAGCCTCCGCAGGGCTTCTTTCACATCGCCATCCTCATGGATCGTGTCATCACGCATCAGACCTGGAACCAAAACAAGCACCACACAGTGTAGGAGAAATATCTAACTGAAGATTATATATGTTTCTAAGACTGAGTGAAAAGATTTATCTGAAGATCCTTGCCAATTTTGTTGAATCCGGCCGCATTGTAGTACCATTTACGGAAGCCGACCAGGAGTCTGCCGGTAGCTGCTGTGTGGGAGGCCAGAATAAGAGTCAGATCATTTGCTGTCAAGATTTGGTTTCCT

Function

NR:

description
PREDICTED: cytochrome b-c1 complex subunit 7-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1793867 False 498 TUCP 0.48 4 58870937 58873691
TU1793863 True 466 lncRNA 0.46 2 58871856 58872355

Neighbor

gene id symbol gene type direction distance location
ptdss1b LOC106588913 coding downstream 8114 58854281 ~ 58863742 (-)
LOC110496613 LOC106588909 coding downstream 19315 58824211 ~ 58852541 (-)
rbm24a LOC106588906 coding downstream 63284 58793299 ~ 58808572 (-)
LOC110496609 cap2 coding downstream 82842 58739765 ~ 58789014 (-)
LOC110496611 vps28 coding downstream 134588 58725463 ~ 58737268 (-)
LOC110496616 lrrc14b coding upstream 1340 58873695 ~ 58876891 (-)
LOC110496617 LOC106588916 coding upstream 5491 58877846 ~ 58906171 (-)
LOC110496620 LOC106588918 coding upstream 42806 58915161 ~ 58918050 (-)
si:ch211-57n23.1 LOC106588919 coding upstream 49673 58922028 ~ 58926488 (-)
ago2 LOC106570475 coding upstream 61913 58934268 ~ 58952492 (-)
G1567865 NA non-coding downstream 49351 58822179 ~ 58822505 (-)
G1567380 NA non-coding downstream 177034 58693972 ~ 58694822 (-)
G1567368 NA non-coding downstream 208969 58662613 ~ 58662887 (-)
G1567353 NA non-coding downstream 282874 58588360 ~ 58588982 (-)
G1567880 NA non-coding upstream 13553 58885908 ~ 58892166 (-)
G1567886 NA non-coding upstream 39134 58911489 ~ 58911850 (-)
G1567889 NA non-coding upstream 55509 58927864 ~ 58932641 (-)
G1567913 NA non-coding upstream 105905 58978260 ~ 58978474 (-)
G1567944 shfm1 non-coding upstream 152667 59025022 ~ 59035338 (-)
G1567875 NA other downstream 1849 58869363 ~ 58870007 (-)
G1567080 NA other downstream 460727 58410499 ~ 58411129 (-)
G1566972 NA other downstream 704159 58167384 ~ 58167697 (-)
G1566923 NA other downstream 793710 58074209 ~ 58078146 (-)
G1566899 NA other downstream 844066 58027511 ~ 58027790 (-)
G1567931 NA other upstream 132490 59004845 ~ 59074648 (-)
G1568017 NA other upstream 282673 59155028 ~ 59157044 (-)
LOC110496637 gng11 other upstream 856824 59712624 ~ 59738593 (-)
G1569198 NA other upstream 1369576 60241931 ~ 60251369 (-)
G1569258 NA other upstream 1476421 60348776 ~ 60350759 (-)

Expression


Co-expression Network