Gene
RNA
| Item | Value |
|---|---|
| gene id | G1567516 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 58877027 ~ 58877460 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1793400 | True | 434 | lncRNA | 0.43 | 1 | 58877027 | 58877460 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496618 | LOC106588914 | coding | upstream | 3335 | 58864013 ~ 58873692 (+) |
| nanos2 | LOC106588910 | coding | upstream | 53098 | 58823202 ~ 58823929 (+) |
| LOC110496610 | aunip | coding | upstream | 137460 | 58737349 ~ 58739567 (+) |
| LOC118941194 | NA | coding | upstream | 491063 | 58379624 ~ 58386065 (+) |
| LOC118941196 | NA | coding | upstream | 492376 | 58384103 ~ 58384651 (+) |
| LOC110496619 | catsper4 | coding | downstream | 29045 | 58906505 ~ 58915399 (+) |
| chrc1 | chrc1 | coding | downstream | 40859 | 58918319 ~ 58922019 (+) |
| trnaa-ugc-140 | NA | coding | downstream | 67801 | 58945261 ~ 58945334 (+) |
| dlx5a | dlx5 | coding | downstream | 79677 | 58957121 ~ 58959671 (+) |
| sem1 | shfm1 | coding | downstream | 147459 | 59024919 ~ 59035388 (+) |
| G1567515 | NA | non-coding | upstream | 7017 | 58869481 ~ 58870010 (+) |
| G1567475 | NA | non-coding | upstream | 55471 | 58821236 ~ 58821556 (+) |
| G1567397 | NA | non-coding | upstream | 135182 | 58739746 ~ 58741845 (+) |
| G1567394 | NA | non-coding | upstream | 144704 | 58731680 ~ 58732323 (+) |
| G1567388 | NA | non-coding | upstream | 152602 | 58724215 ~ 58724425 (+) |
| G1567522 | NA | non-coding | downstream | 12943 | 58890403 ~ 58902491 (+) |
| G1567505 | LOC106588919 | non-coding | downstream | 46841 | 58924301 ~ 58925552 (+) |
| G1567503 | NA | non-coding | downstream | 52113 | 58929573 ~ 58930215 (+) |
| G1567543 | NA | non-coding | downstream | 83782 | 58961242 ~ 58976415 (+) |
| G1567555 | NA | non-coding | downstream | 110588 | 58988048 ~ 58988650 (+) |
| G1566445 | LOC106588893 | other | upstream | 500021 | 58364256 ~ 58377006 (+) |
| G1566224 | tbc1d5 | other | upstream | 930264 | 57941097 ~ 57946763 (+) |
| LOC110496592 | LOC106588883 | other | upstream | 956381 | 57893854 ~ 57935297 (+) |
| LOC110496591 | LOC106588881 | other | upstream | 1013981 | 57851179 ~ 57870361 (+) |
| G1567716 | asb4 | other | downstream | 432524 | 59309984 ~ 59312723 (+) |
| G1567804 | col1a2 | other | downstream | 623713 | 59501173 ~ 59585317 (+) |
| LOC110496636 | bet1 | other | downstream | 767253 | 59644659 ~ 59647881 (+) |
