Gene
RNA
| Item | Value |
|---|---|
| gene id | G1567503 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 58929573 ~ 58930215 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1793387 | True | 643 | lncRNA | 0.39 | 1 | 58929573 | 58930215 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| chrc1 | chrc1 | coding | upstream | 7554 | 58918319 ~ 58922019 (+) |
| LOC110496619 | catsper4 | coding | upstream | 14174 | 58906505 ~ 58915399 (+) |
| LOC110496618 | LOC106588914 | coding | upstream | 55881 | 58864013 ~ 58873692 (+) |
| nanos2 | LOC106588910 | coding | upstream | 105644 | 58823202 ~ 58823929 (+) |
| LOC110496610 | aunip | coding | upstream | 190006 | 58737349 ~ 58739567 (+) |
| trnaa-ugc-140 | NA | coding | downstream | 15046 | 58945261 ~ 58945334 (+) |
| dlx5a | dlx5 | coding | downstream | 26922 | 58957121 ~ 58959671 (+) |
| sem1 | shfm1 | coding | downstream | 94704 | 59024919 ~ 59035388 (+) |
| LOC110496872 | slc25a13 | coding | downstream | 128311 | 59058526 ~ 59156295 (+) |
| pdk4 | LOC106588934 | coding | downstream | 353445 | 59283660 ~ 59298606 (+) |
| G1567505 | LOC106588919 | non-coding | upstream | 4021 | 58924301 ~ 58925552 (+) |
| G1567522 | NA | non-coding | upstream | 27082 | 58890403 ~ 58902491 (+) |
| G1567516 | NA | non-coding | upstream | 52113 | 58877027 ~ 58877460 (+) |
| G1567515 | NA | non-coding | upstream | 59563 | 58869481 ~ 58870010 (+) |
| G1567475 | NA | non-coding | upstream | 108017 | 58821236 ~ 58821556 (+) |
| G1567543 | NA | non-coding | downstream | 31027 | 58961242 ~ 58976415 (+) |
| G1567555 | NA | non-coding | downstream | 57833 | 58988048 ~ 58988650 (+) |
| G1567653 | NA | non-coding | downstream | 259238 | 59189453 ~ 59189762 (+) |
| G1567707 | NA | non-coding | downstream | 391126 | 59321341 ~ 59322412 (+) |
| G1567764 | NA | non-coding | downstream | 494020 | 59424235 ~ 59424987 (+) |
| G1566445 | LOC106588893 | other | upstream | 552567 | 58364256 ~ 58377006 (+) |
| G1566224 | tbc1d5 | other | upstream | 982810 | 57941097 ~ 57946763 (+) |
| LOC110496592 | LOC106588883 | other | upstream | 1008927 | 57893854 ~ 57935297 (+) |
| LOC110496591 | LOC106588881 | other | upstream | 1066527 | 57851179 ~ 57870361 (+) |
| G1567716 | asb4 | other | downstream | 379769 | 59309984 ~ 59312723 (+) |
| G1567804 | col1a2 | other | downstream | 570958 | 59501173 ~ 59585317 (+) |
| LOC110496636 | bet1 | other | downstream | 714498 | 59644659 ~ 59647881 (+) |
