G1567555


Basic Information

Item Value
gene id G1567555
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 58988048 ~ 58988650 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1793454
gaggaggaggtggaggttcAAGTTCATTAGagcctcaaaaattgcagcccaaataaatgctttacagagttcaagtaacaaagacatctcaacatcaactattcagaggagactacatGAATCAGTCCTTCACGGtcgattgctgcaaagaaaacactactaaaggacaccagtaatAAGAAGAGatgtgcttgggccaagaaacatgagtaatggacattggaccggtggaaatctgtccattggtctttgtgagatgcagagtaggtgaacggatgatctctacatgtgtggttcccaccatgaagcatggaggaggtgtgatggtgtggggctgctttgctggtgacactgtctgtgatttatttagaattcaaggcacacttaatcagcatggctaccacagcattctgcagcgatacgccatcccatctggtttgcgcttagtgggactatcatttgtttttcaacaggacaatgacccaacacaccttcaggctgtgtaagggctatttgaccaagaaggagagtgatggagtgctgtttcagatgacctggcccctacaatcacccaacctcaactcaattgagatggtttaggat

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1793454 True 603 lncRNA 0.45 1 58988048 58988650

Neighbor

gene id symbol gene type direction distance location
dlx5a dlx5 coding upstream 28377 58957121 ~ 58959671 (+)
trnaa-ugc-140 NA coding upstream 42714 58945261 ~ 58945334 (+)
chrc1 chrc1 coding upstream 66029 58918319 ~ 58922019 (+)
LOC110496619 catsper4 coding upstream 72649 58906505 ~ 58915399 (+)
LOC110496618 LOC106588914 coding upstream 114356 58864013 ~ 58873692 (+)
sem1 shfm1 coding downstream 36269 59024919 ~ 59035388 (+)
LOC110496872 slc25a13 coding downstream 69876 59058526 ~ 59156295 (+)
pdk4 LOC106588934 coding downstream 295010 59283660 ~ 59298606 (+)
sgce sgce coding downstream 451126 59439776 ~ 59472172 (+)
LOC110496636 bet1 coding downstream 656009 59644659 ~ 59647881 (+)
G1567543 NA non-coding upstream 11633 58961242 ~ 58976415 (+)
G1567503 NA non-coding upstream 57833 58929573 ~ 58930215 (+)
G1567505 LOC106588919 non-coding upstream 62496 58924301 ~ 58925552 (+)
G1567522 NA non-coding upstream 85557 58890403 ~ 58902491 (+)
G1567516 NA non-coding upstream 110588 58877027 ~ 58877460 (+)
G1567653 NA non-coding downstream 200803 59189453 ~ 59189762 (+)
G1567707 NA non-coding downstream 332691 59321341 ~ 59322412 (+)
G1567764 NA non-coding downstream 435585 59424235 ~ 59424987 (+)
G1567804 col1a2 non-coding downstream 512523 59501173 ~ 59585317 (+)
G1566445 LOC106588893 other upstream 611042 58364256 ~ 58377006 (+)
G1566224 tbc1d5 other upstream 1041285 57941097 ~ 57946763 (+)
LOC110496592 LOC106588883 other upstream 1067402 57893854 ~ 57935297 (+)
G1567716 asb4 other downstream 321334 59309984 ~ 59312723 (+)
LOC110496635 NA other downstream 763601 59747650 ~ 59753905 (+)

Expression


Co-expression Network