Gene
RNA
| Item | Value |
|---|---|
| gene id | G1568027 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 59180098 ~ 59180748 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1794053 | True | 322 | lncRNA | 0.53 | 2 | 59180098 | 59180748 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496627 | LOC106588646 | coding | downstream | 119187 | 59060343 ~ 59060911 (-) |
| dlx6a | dlx6 | coding | downstream | 213967 | 58962944 ~ 58966131 (-) |
| ago2 | LOC106570475 | coding | downstream | 227606 | 58934268 ~ 58952492 (-) |
| si:ch211-57n23.1 | LOC106588919 | coding | downstream | 253610 | 58922028 ~ 58926488 (-) |
| LOC110496620 | LOC106588918 | coding | downstream | 262048 | 58915161 ~ 58918050 (-) |
| asb4 | asb4 | coding | upstream | 113489 | 59294237 ~ 59320224 (-) |
| ppp1r9a | ppp1r9a | coding | upstream | 141876 | 59322624 ~ 59441836 (-) |
| casd1 | casd1 | coding | upstream | 292420 | 59473168 ~ 59487287 (-) |
| col1a2 | col1a2 | coding | upstream | 320420 | 59501168 ~ 59525014 (-) |
| zgc:85777 | ivd | coding | upstream | 467200 | 59647948 ~ 59696386 (-) |
| G1568021 | NA | non-coding | downstream | 11909 | 59167947 ~ 59168189 (-) |
| G1567979 | NA | non-coding | downstream | 89399 | 59090009 ~ 59090699 (-) |
| G1567944 | shfm1 | non-coding | downstream | 144760 | 59025022 ~ 59035338 (-) |
| G1567913 | NA | non-coding | downstream | 201624 | 58978260 ~ 58978474 (-) |
| G1567889 | NA | non-coding | downstream | 247457 | 58927864 ~ 58932641 (-) |
| G1568035 | NA | non-coding | upstream | 14151 | 59194899 ~ 59273220 (-) |
| G1568121 | NA | non-coding | upstream | 188827 | 59369575 ~ 59371107 (-) |
| G1568122 | NA | non-coding | upstream | 189849 | 59370597 ~ 59374480 (-) |
| G1568136 | NA | non-coding | upstream | 219305 | 59400053 ~ 59400923 (-) |
| G1568395 | gng11 | non-coding | upstream | 515081 | 59695829 ~ 59738616 (-) |
| G1568017 | NA | other | downstream | 23054 | 59155028 ~ 59157044 (-) |
| G1567931 | NA | other | downstream | 105450 | 59004845 ~ 59074648 (-) |
| G1567871 | LOC106588914 | other | downstream | 306407 | 58870937 ~ 58873691 (-) |
| G1567875 | NA | other | downstream | 310091 | 58869363 ~ 58870007 (-) |
| G1567080 | NA | other | downstream | 768969 | 58410499 ~ 58411129 (-) |
| LOC110496637 | gng11 | other | upstream | 548431 | 59712624 ~ 59738593 (-) |
| G1569198 | NA | other | upstream | 1061183 | 60241931 ~ 60251369 (-) |
| G1569258 | NA | other | upstream | 1168028 | 60348776 ~ 60350759 (-) |
| G1569277 | NA | other | upstream | 1199105 | 60379853 ~ 60389092 (-) |
| LOC110496651 | NA | other | upstream | 1429739 | 60610487 ~ 60642154 (-) |
