G1567653


Basic Information

Item Value
gene id G1567653
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 59189453 ~ 59189762 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1793582
tactggaggaaacaggtacaaaacctgaaacgtttgacccaagttaaacaatttaaaggcaatgctaccaaatactaattgagtgtatgtaaacatctgacccaatgggaatgtgatgaaataaataaaatattaaataaataattatccccactattattctgacatttcatattcttaaaataaagtgctgatcctaactgacctaaaacagggaatttttactaggattaaatgtcaggaattgtgaaaaactgagtttaaatgtatttgactaaggtgtatgtaaacttctgacttcaactgtagg

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1793582 True 310 lncRNA 0.31 1 59189453 59189762

Neighbor

gene id symbol gene type direction distance location
LOC110496872 slc25a13 coding upstream 33158 59058526 ~ 59156295 (+)
sem1 shfm1 coding upstream 154065 59024919 ~ 59035388 (+)
dlx5a dlx5 coding upstream 229782 58957121 ~ 58959671 (+)
trnaa-ugc-140 NA coding upstream 244119 58945261 ~ 58945334 (+)
chrc1 chrc1 coding upstream 267434 58918319 ~ 58922019 (+)
pdk4 LOC106588934 coding downstream 93898 59283660 ~ 59298606 (+)
sgce sgce coding downstream 250014 59439776 ~ 59472172 (+)
LOC110496636 bet1 coding downstream 454897 59644659 ~ 59647881 (+)
LOC100305210 tfpi2 coding downstream 513930 59703692 ~ 59709295 (+)
LOC110496635 NA coding downstream 557888 59747650 ~ 59753905 (+)
G1567555 NA non-coding upstream 200803 58988048 ~ 58988650 (+)
G1567543 NA non-coding upstream 213038 58961242 ~ 58976415 (+)
G1567503 NA non-coding upstream 259238 58929573 ~ 58930215 (+)
G1567505 LOC106588919 non-coding upstream 263901 58924301 ~ 58925552 (+)
G1567522 NA non-coding upstream 286962 58890403 ~ 58902491 (+)
G1567707 NA non-coding downstream 131579 59321341 ~ 59322412 (+)
G1567764 NA non-coding downstream 234473 59424235 ~ 59424987 (+)
G1567804 col1a2 non-coding downstream 311411 59501173 ~ 59585317 (+)
G1567808 NA non-coding downstream 326704 59516466 ~ 59520161 (+)
LOC110496618 LOC106588914 other upstream 315763 58864013 ~ 58873692 (+)
G1566445 LOC106588893 other upstream 812447 58364256 ~ 58377006 (+)
G1566224 tbc1d5 other upstream 1242690 57941097 ~ 57946763 (+)
G1567716 asb4 other downstream 120222 59309984 ~ 59312723 (+)
G1568568 NA other downstream 714402 59904164 ~ 59905204 (+)

Expression


Co-expression Network