Gene
RNA
| Item | Value |
|---|---|
| gene id | G1567707 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 59321341 ~ 59322412 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1793645 | True | 661 | lncRNA | 0.47 | 4 | 59321341 | 59322412 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| pdk4 | LOC106588934 | coding | upstream | 22735 | 59283660 ~ 59298606 (+) |
| LOC110496872 | slc25a13 | coding | upstream | 165046 | 59058526 ~ 59156295 (+) |
| sem1 | shfm1 | coding | upstream | 285953 | 59024919 ~ 59035388 (+) |
| dlx5a | dlx5 | coding | upstream | 361670 | 58957121 ~ 58959671 (+) |
| trnaa-ugc-140 | NA | coding | upstream | 376007 | 58945261 ~ 58945334 (+) |
| sgce | sgce | coding | downstream | 117364 | 59439776 ~ 59472172 (+) |
| LOC110496636 | bet1 | coding | downstream | 322247 | 59644659 ~ 59647881 (+) |
| LOC100305210 | tfpi2 | coding | downstream | 381280 | 59703692 ~ 59709295 (+) |
| LOC110496635 | NA | coding | downstream | 425238 | 59747650 ~ 59753905 (+) |
| LOC110496640 | LOC106588943 | coding | downstream | 447571 | 59769983 ~ 59851172 (+) |
| G1567653 | NA | non-coding | upstream | 131579 | 59189453 ~ 59189762 (+) |
| G1567555 | NA | non-coding | upstream | 332691 | 58988048 ~ 58988650 (+) |
| G1567543 | NA | non-coding | upstream | 344926 | 58961242 ~ 58976415 (+) |
| G1567503 | NA | non-coding | upstream | 391126 | 58929573 ~ 58930215 (+) |
| G1567505 | LOC106588919 | non-coding | upstream | 395789 | 58924301 ~ 58925552 (+) |
| G1567764 | NA | non-coding | downstream | 101823 | 59424235 ~ 59424987 (+) |
| G1567804 | col1a2 | non-coding | downstream | 178761 | 59501173 ~ 59585317 (+) |
| G1567808 | NA | non-coding | downstream | 194054 | 59516466 ~ 59520161 (+) |
| G1567805 | NA | non-coding | downstream | 198542 | 59520954 ~ 59543221 (+) |
| G1567716 | asb4 | other | upstream | 8618 | 59309984 ~ 59312723 (+) |
| LOC110496618 | LOC106588914 | other | upstream | 447651 | 58864013 ~ 58873692 (+) |
| G1566445 | LOC106588893 | other | upstream | 944335 | 58364256 ~ 58377006 (+) |
| G1568568 | NA | other | downstream | 581752 | 59904164 ~ 59905204 (+) |
| cdk6 | cdk6 | other | downstream | 934574 | 60256707 ~ 60351422 (+) |
