G1568385


Basic Information

Item Value
gene id G1568385
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 59846787 ~ 59847176 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1794455
ACTAACTTGGTGATTTTCAAAAGAGGAACAGCAGATAAGCGAGTGTAAATTCATCAATCTACTCTACCTGCACTAAACTCAGTAAGGAGAAGCTATTGTCCTTCAATTAATCACAGGAAATTGTGATTCAATTCTGTTTCTTCATGTCTAAAAACTGCCATTAACATTTATCATATGAATCCACATTTCCTGAGCTCAGTCACATTACATTGATTTAATGATCATGCATATTGATGAAAATGTGTGGCTGTGCACTAAAATGCTGTGAGGTGACAGTGAGGGACTAAATTGCTGTGAGGTGACAGTGAGGGACTAAAATGCTGTGAGGTGACAGTGAGGGACTAAATTGCTGTGAGGTGACAGTGAGGTACTAAAATACTGTGAGGTGAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1794455 True 390 lncRNA 0.39 1 59846787 59847176

Neighbor

gene id symbol gene type direction distance location
LOC110496635 NA coding upstream 92882 59747650 ~ 59753905 (+)
LOC100305210 tfpi2 coding upstream 137492 59703692 ~ 59709295 (+)
LOC110496636 bet1 coding upstream 198906 59644659 ~ 59647881 (+)
sgce sgce coding upstream 374615 59439776 ~ 59472172 (+)
pdk4 LOC106588934 coding upstream 548181 59283660 ~ 59298606 (+)
cdk6 cdk6 coding downstream 409531 60256707 ~ 60351422 (+)
LOC110496955 LOC106588949 coding downstream 508774 60355950 ~ 60361942 (+)
LOC110496647 LOC106588950 coding downstream 520929 60368105 ~ 60370534 (+)
efcab1 efcab1 coding downstream 523476 60370652 ~ 60372615 (+)
LOC118941198 pex1 coding downstream 527754 60374930 ~ 60401241 (+)
G1568384 NA non-coding upstream 1412 59845146 ~ 59845375 (+)
G1568373 NA non-coding upstream 24614 59821376 ~ 59822173 (+)
G1568310 NA non-coding upstream 89373 59710844 ~ 59757414 (+)
G1568302 NA non-coding upstream 108207 59696765 ~ 59738580 (+)
G1568244 NA non-coding upstream 198475 59602283 ~ 59648312 (+)
LOC110496640 LOC106588943 non-coding downstream 3119 59769983 ~ 59851172 (+)
G1568506 NA non-coding downstream 8293 59855469 ~ 59855716 (+)
G1568564 LOC100136012 non-coding downstream 54373 59901549 ~ 59901857 (+)
G1568598 NA non-coding downstream 101742 59948918 ~ 59950284 (+)
G1568612 NA non-coding downstream 115528 59962704 ~ 59963052 (+)
G1567804 col1a2 other upstream 261470 59501173 ~ 59585317 (+)
G1567716 asb4 other upstream 534064 59309984 ~ 59312723 (+)
sem1 shfm1 other upstream 811452 59024919 ~ 59035388 (+)
G1568568 NA other downstream 56988 59904164 ~ 59905204 (+)
G1569099 NA other downstream 762772 60609948 ~ 60616294 (+)
recql4 recql4 other downstream 2120772 61967906 ~ 61991797 (+)
G1571059 NA other downstream 2414448 62261624 ~ 62262217 (+)

Expression


Co-expression Network