Gene
RNA
| Item | Value |
|---|---|
| gene id | G1568524 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 59869794 ~ 59870109 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| gastrula zinc finger protein XlCGF52.1-like, partial |
| id | description |
|---|
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1794612 | True | 316 | lncRNA | 0.48 | 1 | 59869794 | 59870109 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496637 | gng11 | coding | downstream | 131201 | 59712624 ~ 59738593 (-) |
| LOC110496638 | gng11 | coding | downstream | 171630 | 59696846 ~ 59698164 (-) |
| zgc:85777 | ivd | coding | downstream | 173408 | 59647948 ~ 59696386 (-) |
| LOC110496639 | NA | coding | downstream | 190770 | 59673674 ~ 59679024 (-) |
| col1a2 | col1a2 | coding | downstream | 344780 | 59501168 ~ 59525014 (-) |
| LOC110496642 | vps50 | coding | upstream | 36797 | 59906906 ~ 59932090 (-) |
| LOC110496641 | vps50 | coding | upstream | 148525 | 60018634 ~ 60200664 (-) |
| LOC110496644 | LOC106588945 | coding | upstream | 331839 | 60201948 ~ 60254724 (-) |
| LOC110496648 | NA | coding | upstream | 502409 | 60372518 ~ 60374871 (-) |
| LOC110496650 | elmo1 | coding | upstream | 554940 | 60425049 ~ 60603918 (-) |
| G1568517 | NA | non-coding | downstream | 5558 | 59863938 ~ 59864236 (-) |
| G1568505 | NA | non-coding | downstream | 16559 | 59853010 ~ 59853235 (-) |
| G1568502 | NA | non-coding | downstream | 18661 | 59849629 ~ 59851133 (-) |
| G1568438 | NA | non-coding | downstream | 109512 | 59757640 ~ 59760282 (-) |
| G1568395 | gng11 | non-coding | downstream | 131178 | 59695829 ~ 59738616 (-) |
| G1568534 | NA | non-coding | upstream | 11341 | 59881450 ~ 59881671 (-) |
| G1568551 | NA | non-coding | upstream | 21912 | 59892021 ~ 59892520 (-) |
| G1568552 | NA | non-coding | upstream | 23121 | 59893230 ~ 59893462 (-) |
| G1568553 | NA | non-coding | upstream | 23479 | 59893588 ~ 59893838 (-) |
| G1568565 | LOC100136012 | non-coding | upstream | 31584 | 59901693 ~ 59901973 (-) |
| G1568017 | NA | other | downstream | 712750 | 59155028 ~ 59157044 (-) |
| G1567931 | NA | other | downstream | 795146 | 59004845 ~ 59074648 (-) |
| G1567871 | LOC106588914 | other | downstream | 996103 | 58870937 ~ 58873691 (-) |
| G1567875 | NA | other | downstream | 999787 | 58869363 ~ 58870007 (-) |
| G1569198 | NA | other | upstream | 371822 | 60241931 ~ 60251369 (-) |
| G1569258 | NA | other | upstream | 478667 | 60348776 ~ 60350759 (-) |
| G1569277 | NA | other | upstream | 509744 | 60379853 ~ 60389092 (-) |
| LOC110496651 | NA | other | upstream | 740378 | 60610487 ~ 60642154 (-) |
| G1569439 | NA | other | upstream | 823269 | 60693378 ~ 60694099 (-) |
