G1568912


Basic Information

Item Value
gene id G1568912
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 60196982 ~ 60197240 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1795061
taattaaaaatcctacaatgtgattttctggattttctttctcattttgtctgtcatagttgaagtgtacctatgatgaaaattacaggcctcatctttttaagtgggagaacttgcacaattggtggctgactaaatacttttttgccccactgtatatattatacaTAACTGTACAGTTAGGTGGTTTATTGGTTAACAGTAATGCCAACAACTGTCTGAATGCAGTGAAATGAAATAGCATCCGAGAGTACTAAAT

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1795061 True 259 lncRNA 0.34 1 60196982 60197240

Neighbor

gene id symbol gene type direction distance location
LOC110496640 LOC106588943 coding upstream 345810 59769983 ~ 59851172 (+)
LOC110496635 NA coding upstream 443077 59747650 ~ 59753905 (+)
LOC100305210 tfpi2 coding upstream 487687 59703692 ~ 59709295 (+)
LOC110496636 bet1 coding upstream 549101 59644659 ~ 59647881 (+)
sgce sgce coding upstream 724810 59439776 ~ 59472172 (+)
cdk6 cdk6 coding downstream 59467 60256707 ~ 60351422 (+)
LOC110496955 LOC106588949 coding downstream 158710 60355950 ~ 60361942 (+)
LOC110496647 LOC106588950 coding downstream 170865 60368105 ~ 60370534 (+)
efcab1 efcab1 coding downstream 173412 60370652 ~ 60372615 (+)
LOC118941198 pex1 coding downstream 177690 60374930 ~ 60401241 (+)
G1568647 NA non-coding upstream 165858 60030389 ~ 60031124 (+)
G1568621 NA non-coding upstream 218861 59977893 ~ 59978121 (+)
G1568617 NA non-coding upstream 226860 59969871 ~ 59970122 (+)
G1568615 NA non-coding upstream 230137 59966112 ~ 59966845 (+)
G1568612 NA non-coding upstream 233930 59962704 ~ 59963052 (+)
G1568925 NA non-coding downstream 14902 60212142 ~ 60213212 (+)
G1568952 NA non-coding downstream 73103 60270343 ~ 60270576 (+)
G1568954 NA non-coding downstream 75197 60272437 ~ 60272731 (+)
G1568957 NA non-coding downstream 84444 60281684 ~ 60282580 (+)
G1568568 NA other upstream 291778 59904164 ~ 59905204 (+)
G1567804 col1a2 other upstream 611665 59501173 ~ 59585317 (+)
G1567716 asb4 other upstream 884259 59309984 ~ 59312723 (+)
G1569099 NA other downstream 412708 60609948 ~ 60616294 (+)
recql4 recql4 other downstream 1770708 61967906 ~ 61991797 (+)
G1571059 NA other downstream 2064384 62261624 ~ 62262217 (+)
LOC110496878 LOC106588982 other downstream 2286373 62483507 ~ 62484818 (+)

Expression


Co-expression Network