G1569276


Basic Information

Item Value
gene id G1569276
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 60378914 ~ 60387859 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1795495
GGAAAGTACAAGGTTAGGATAATCAGAACAATACATTCAATAGAATTACATAtgatgtcaaatgtaaatgttactCACCTGTGGTTGTAAAGGCTGCAGGTAGATACTGGTGACTACTTTAGGAGTTGATTTGATTGGCTTGATTCTCACTGATGAGTGTGGGTCGAAATGGAGCCTAGTTCCCAGGGATAGTGGAATCTGAGACATACAATTATGCTTGAATACATATAGCTTCAATATAAATCAGTTTACAATATGAATCAATTTACACAAACCTGTAAACTGTGTCCTAAGAGCTAATGGAAACTATGATTGGGTAGTATGATTTTGCTCAATAATGttctgtgctgctaccatgttgtgctactgCCATGCGTTGTTAtgcgttgctaccatgctatgttgtcatgtgttgctgccatgctgttatCTTAGGTcactatttatgtagtgttgtctcattTTTGTgacgtgtgttttgtcctatattataattttttaattCCCAGCCCCGctggaggccttttgccttctgctaggcccgtcattgtaaataagaatttgttcttaactgacttgcctagttaaataaaggttaaataacattttaaaaattacAAAATTGAGAATAGTTTATTTGATTAGGCCTACATTGTGCCCAACTTTTAGACCATGGCTAATGTACATGTAATCACCCAGACCCTTCCACTGTGGAGCTCTTCCTCTCTAAAAGATCCTTTCAGTTCCTCTGTATGGTGACATACCACCTTGACTACAGTCGtggacaaaagttttgagaatgatacaaatatgaatttccacagtctgctgcctcagtgtctttagatatttttgccaGATGTTACTATTGAATActtaagtataattacaagcggcaaaggcttttattgacaattacatgaagttgatgcaaagagtcaatatttgcagtgttg
>TU1795494
GGAAAGTACAAGGTTAGGATAATCAGAACAATACATTCAATAGAATTACATAtgatgtcaaatgtaaatgttactCACCTGTGGTTGTAAAGGCTGCAGGTAGATACTGGTGACTACTTTAGGAGTTGATTTGATTGGCTTGATTCTCACTGATGAGTGTGGGTCGAAATGGAGCCTAGTTCCCAGGGATAGTGGAATCTGAGACATACAATTATGCTTGA

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1795495 False 956 lncRNA 0.37 2 60378914 60387859
TU1795494 True 221 lncRNA 0.39 2 60379649 60387859

Neighbor

gene id symbol gene type direction distance location
LOC110496648 NA coding downstream 4043 60372518 ~ 60374871 (-)
LOC110496644 LOC106588945 coding downstream 124190 60201948 ~ 60254724 (-)
LOC110496641 vps50 coding downstream 178372 60018634 ~ 60200664 (-)
LOC110496642 vps50 coding downstream 446824 59906906 ~ 59932090 (-)
LOC110496637 gng11 coding downstream 640321 59712624 ~ 59738593 (-)
LOC110496650 elmo1 coding upstream 37190 60425049 ~ 60603918 (-)
LOC110496651 NA coding upstream 228397 60610487 ~ 60642154 (-)
c18h18orf21 cssa27h18orf21 coding upstream 257751 60645610 ~ 60670570 (-)
elp2 elp2 coding upstream 879422 61267281 ~ 61323861 (-)
LOC110496657 LOC106588974 coding upstream 1091169 61479028 ~ 61493313 (-)
G1569173 NA non-coding downstream 96334 60281305 ~ 60282580 (-)
G1569215 NA non-coding downstream 103230 60275447 ~ 60275684 (-)
G1569214 NA non-coding downstream 103521 60275189 ~ 60275393 (-)
G1569212 NA non-coding downstream 104553 60274126 ~ 60274361 (-)
G1569290 NA non-coding upstream 16201 60404060 ~ 60404542 (-)
G1569299 NA non-coding upstream 26334 60414193 ~ 60424693 (-)
G1569312 NA non-coding upstream 54801 60442660 ~ 60442985 (-)
G1569313 NA non-coding upstream 57926 60445785 ~ 60447859 (-)
G1569314 NA non-coding upstream 62770 60450629 ~ 60451445 (-)
G1569258 NA other downstream 28155 60348776 ~ 60350759 (-)
G1569198 NA other downstream 127545 60241931 ~ 60251369 (-)
G1568017 NA other downstream 1221870 59155028 ~ 59157044 (-)
G1567931 NA other downstream 1304266 59004845 ~ 59074648 (-)
G1569439 NA other upstream 305519 60693378 ~ 60694099 (-)
G1570468 NA other upstream 903445 61291304 ~ 61293151 (-)
G1570695 NA other upstream 1277469 61665328 ~ 61665910 (-)

Expression


Co-expression Network