G1570016


Basic Information

Item Value
gene id G1570016
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 61254316 ~ 61257570 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1796329
caagggggccgaatactttcgcaaggcactgtacatacatacacacacgtgttTTTGACCTTTAAACTGATAGAAACCGAATAACAGAGTAGCCCTGGCTAATACAGAACGTTAGCATGAAAAAGCAGTTTATTTCCAGTTATTATGAGCCCTTTAACTACTAACATTGCATTTGAAGAACTATTGTTGCAGacgttgagaacaagttttaatTAATAATAGAAAATTAGGGCACATTGCAAATAAAAGTAACAGTACCTGATAAACAGCATTTGGCATTTTGTAAGAACAATAAATAGTGACTGTCAGATTCCATGAATGCTGAGAAAAGAACATTTTtgatgtgttattgactgttctATTGGTTAATTCTGATACAGCTAGCCAAAGCTATTACGTGTTGTACACTTATTGCCCTCAGCATCTTGCAGCATGTGTAATGCTGCATGTAGTTTACATTAtattgtgtgtgggggggtggggggggggggtttctcaCTGAGAATCTTGGCTTTGACATTGACTGCTTGATGATGTCCTCTTAAAGACAGGATGTAGAAATGAAACTGCCGTGACAGAAGAAACATAGTGGATTTGTCACGACAGTCGTAAAAACAGGGAACTCCTATGTGAATTATACATTTTATTTCATGCCATCTTGAGAAAGCCAAATACCAAATATTTCATACATACATCAACACCATCAGGGTATCAGCAAATTTTACACAGTCacatataatgtaatatataaaatgtgttttttttctttttctgaaGGAACAACCGACTCTGGTGGGCAAAGAGGGATGAGAAAGAAGTCTTTTCGCTTCATGGAGGTCTGTGCTGCTGTGTTGCGGCTCTGGACAGCCCCATTGACTCCAGGCTAGGGGGAGGAGCTCAGACAGGAATTCACACCTGGATGTGTCCAATAGCAGTACTGTCTCCAACCTGCTCCTTCCCAACCATTCCTTGTCCTCCAATAGGCTTCCTCCTTGGCTGACAGACATCATCAGCGTTCAGACGCCAAGCCCAGCTCACAGAGCAGCCCACTCTCTGTAATGAGTTGTCCCCAAGTGATCTGTCTCACCCTGTATGTTCCAGGTGTTGGAGCATTGAATGGTTAAGAAGTCATGACAGGTTATACAATTTACAGATGCGTTACAGATTCTTGTTGAGTTAATTTAGCCTGGCCCATACCATTACCACCACTACCTACTGGGCCTGGTGTATACTGTGGCTCCTGCAGGGTACAGGATATGACTACAAGCACAGAGCTCAACAAACGCCTTTTAAAAACTAAAACTGGAACCAAGACACCAATGGTGAAATATATGCTGAAACAAATCTAGACTTCTGATGATGATACGGAGCTTTTTGGTGGATTTCGTCCACTTTGTGTTTTTCTTGTTCTTGTGACAACAATTGTACAAATAAAATTACGATAGCTAGCTATGTCTACGGCCCTATTTTAGTCCAAGAAATTACCTTTGGGCCAACTGCACAGAAATACATTTCTATAGCAACTCTGATGTATGTTTCACTGTTGCTAAGTGCCAGGTGATTTAGAGGTGCTTCTCCCAGTctgtggttcaattgttgtggtCAGTTCTGTGGTCTCCATCGGCGCCATTTCTGCTCAAACCACATCTGGATAGGGTTCACATATGGCTCACATATCTTCCACTTGCCATTTTGGTGATTGAAATGTAGATAAACTAACTGAAACAGCTTAGAGGGACTTAATTTCACGGTTTCAAAACTACTGATGAAACCGAAATGGCAAACCCACATCCTCATCACGATCTGAATGTATGTCTTGTCAACAGAACCTCTGTCCAAGTCTTTGATCTCAGTTTCTCACCACTTTTGATGCTGTCTGACCATGCACCTATTTCATTGACTTATGAAACGTATATTCATTAGAAAGATGCTTCTTTAGCCTCACTACAGCCAGATAATGGAGCGACATTACAGTTTCTGGACCATTTACAGTGGTAATGGGAGCCTGTTTGGCGAGGCCTCGTCTGGACACATCACTAGGATACGGTGTGCACTCCTGTTTCCCTATAGGTGTGTGTcttgatgtgtttgtgtgtgtgtcaacacaTAGTGAACACGGAGAGTCATTACTATTGTCATTGTTTCCTGGAAATCTGTCCTGTTTGGTTCTGTTGCCTTCTAAAggcattctactgtactgtagtatttcATTGTTGTTTGGAGGTCAATTAAACTAGTGAAGTTGAAACACATTAAAGGCCTATGCAAAGAGATAGCATAATCTTTAAGAAAAATGAATGGTTCAAATGTAGCAAAGTGGAAAATAAGCTGTGTGCGTATTACTCCAAGTTAAAAGAATTGGCCCCTGGTgtctttccacattttgctagTCACAGAAATTAGAGTAATCTTACTTCTTGCCATGAGCCAATCCATTTAACACAATTAACACACTACAATGATGCAGTAATATTACACAAACCAATTTGTCTTACATTTTGCTTTGTAGTAGGCCAGTTTTTACGGTTTCATTAGTTTTTCAGGACCTCCTACCCctatacagacccccccccccccatatgttCATTCACAGCATACTCAAAGCTAACGGTACGTCAAAGTCAGAAAGTATGCTATTTACATGCTTGTTCACAATGGTGAATTTTGATGAATCCTATGTCAGTCCGGTCTGGAACTCCTTTGTTCCTATAGTAACGCCTCCCAGGCATTGACGTAGCTGAAATGCTCACGTTTTGACAGGCTCACACATAGTCCAGTGtatgacaaaataaaaacaacaacataaaaacCCTCCGAAGCAGATCCACCCCAGGTCTGGTCAGGTCCTCTGCTGTTGGGGTGGTGGGGTGAGACCAAAGGAGGTTGTTGCTCTGGATCGTGTGTCATTTGTAAGGTCCTCCTGTGCCCTCCCCCCTTCCCTTCCCGACCCATGGTTCTAGAGAGGGGTTCTAGAGACCGAGGCATGATGAGTGGAACCAACTTCCCCCTCCCTGGTCCAACACACATATTATTCCAATGTTGCTGACAGCCTAAGCTAGGGTCTGCTTGTTGTTTTTAAAACACAGATGTCCTTTCTTGGAAGCGCCAGGGGAGACTGATGCTCACAGGCCTGAGACCATGACCCGGTAGGACGGGGGCATGTGTCTGTGCCGCGGGCTGGAGCCGGGGCTGGCGTTGGGGCTGGTACAGCTGGCGT

Function

NR:

description
PREDICTED: gamma-aminobutyric acid type B receptor subunit 2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1796329 True 3217 lncRNA 0.43 2 61254316 61257570

Neighbor

gene id symbol gene type direction distance location
c18h18orf21 cssa27h18orf21 coding downstream 583746 60645610 ~ 60670570 (-)
LOC110496651 NA coding downstream 612162 60610487 ~ 60642154 (-)
LOC110496650 elmo1 coding downstream 650398 60425049 ~ 60603918 (-)
LOC110496648 NA coding downstream 879445 60372518 ~ 60374871 (-)
LOC110496644 LOC106588945 coding downstream 999592 60201948 ~ 60254724 (-)
elp2 elp2 coding upstream 9711 61267281 ~ 61323861 (-)
LOC110496657 LOC106588974 coding upstream 221458 61479028 ~ 61493313 (-)
LOC110496659 LOC106588970 coding upstream 288089 61545659 ~ 61587847 (-)
LOC110496662 LOC106588967 coding upstream 432481 61690051 ~ 61708402 (-)
hsf1a hsf1a coding upstream 539442 61797012 ~ 61828577 (-)
G1569933 NA non-coding downstream 152225 61097237 ~ 61102091 (-)
G1569484 NA non-coding downstream 481834 60772246 ~ 60772482 (-)
G1569476 NA non-coding downstream 485121 60768489 ~ 60769195 (-)
G1569475 NA non-coding downstream 499153 60753492 ~ 60755163 (-)
G1569465 NA non-coding downstream 510095 60743345 ~ 60744221 (-)
G1570633 NA non-coding upstream 268944 61526514 ~ 61526841 (-)
G1570649 NA non-coding upstream 330576 61588146 ~ 61588404 (-)
G1570657 NA non-coding upstream 345692 61603262 ~ 61603611 (-)
G1570661 NA non-coding upstream 351329 61608899 ~ 61609236 (-)
G1570664 NA non-coding upstream 357358 61614928 ~ 61615137 (-)
G1569439 NA other downstream 560217 60693378 ~ 60694099 (-)
G1569277 NA other downstream 865224 60379853 ~ 60389092 (-)
G1569258 NA other downstream 903557 60348776 ~ 60350759 (-)
G1569198 NA other downstream 1002947 60241931 ~ 60251369 (-)
G1570468 NA other upstream 33734 61291304 ~ 61293151 (-)
G1570695 NA other upstream 407758 61665328 ~ 61665910 (-)
G1572487 NA other upstream 2178228 63435798 ~ 63491169 (-)
G1573054 NA other upstream 2756209 64013779 ~ 64014965 (-)

Expression


Co-expression Network