G1571131


Basic Information

Item Value
gene id G1571131
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 62373828 ~ 62374467 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1797565
CTAACGCATGcatgcgtctctctctctcgacatcACAATGCATCATTCCCTGTGCTGTGCCACATCTACCCAACACTGACAACACAATGCATGGCATGTCGCATTGATCATGTTGCTCACAGAAAAAGGGAAAGACCTGTTCTCACAATATAACAACAAGCGTTAACACTTAACTTGAAGGGTTCCGTACCTACATAAAGACTCCATAACACATTCCTAACGATACAAACTGCCTTCCTAAAGCatacataacacatacatactgcCTTCCTAAACCatacatactgcCTTCCTAAAGCatacataacacatacatactgcCTTCCTAAACcatgcataacacatacatactgcCTTCCTAaaccatacataacacatacatactgcCTTCCTAAAGCATACATAACAcatgcataacacatacattctgCCTTCCTAAACCATACATACTGCCTTCCTaaaccatacataacacattcatactgCCTTCCTAAACCATTCATACTGCCTTCCTAaaccatacataacacatacataaTGCCTTCCTaaaccatacataacacattcataaaca

Function

NR:

description
PREDICTED: filaggrin-2-like isoform X33

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1797565 True 574 lncRNA 0.40 2 62373828 62374467

Neighbor

gene id symbol gene type direction distance location
LOC110496670 LOC106588981 coding upstream 225290 62144489 ~ 62148538 (+)
LOC110496875 LOC106588980 coding upstream 364088 61994622 ~ 62009740 (+)
recql4 recql4 coding upstream 382031 61967906 ~ 61991797 (+)
LOC110496665 bop1 coding upstream 450913 61827912 ~ 61922915 (+)
LOC118941200 LOC106588959 coding upstream 585019 61774658 ~ 61788809 (+)
LOC110496672 LOC106588986 coding downstream 32948 62407415 ~ 62435133 (+)
LOC110496877 LOC106588989 coding downstream 76935 62451402 ~ 62474282 (+)
LOC110496878 LOC106588982 coding downstream 109040 62483507 ~ 62484818 (+)
LOC110496879 LOC106588990 coding downstream 127564 62502031 ~ 62570890 (+)
LOC110496880 dennd3 coding downstream 205277 62579744 ~ 62624967 (+)
G1571128 NA non-coding upstream 4426 62369124 ~ 62369402 (+)
G1571123 NA non-coding upstream 24312 62349247 ~ 62349516 (+)
G1571122 NA non-coding upstream 27907 62345719 ~ 62345921 (+)
G1571121 NA non-coding upstream 29736 62343886 ~ 62344092 (+)
G1571105 NA non-coding upstream 45698 62327927 ~ 62328130 (+)
G1571133 NA non-coding downstream 1233 62375700 ~ 62376085 (+)
G1571201 NA non-coding downstream 44261 62418728 ~ 62473094 (+)
G1571224 NA non-coding downstream 91641 62466108 ~ 62466509 (+)
G1571228 NA non-coding downstream 108212 62482679 ~ 62482904 (+)
G1571059 NA other upstream 111611 62261624 ~ 62262217 (+)
G1569099 NA other upstream 1757534 60609948 ~ 60616294 (+)
cdk6 cdk6 other upstream 2041528 60256707 ~ 60351422 (+)
G1568568 NA other upstream 2468624 59904164 ~ 59905204 (+)
G1571298 LOC106570403 other downstream 497502 62871969 ~ 62875067 (+)
G1573779 NA other downstream 2526701 64901168 ~ 64902474 (+)
G1573889 LOC106589019 other downstream 2599387 64973854 ~ 64975933 (+)

Expression


Co-expression Network