G1571156


Basic Information

Item Value
gene id G1571156
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 62380823 ~ 62383395 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1797595
CTTGCTGGGTCGCCTTGCTGGGTCACCCTGCTGGGTCGCCTTGCTGGGTCACCCTGCTGGGTCGCCTTGCTGGGTCACCCTGCTGGGTCGCCTTGCTGGGTCACCCTGCCGGGTCGCCTTGCCGGGTCGCCTTGCCGGGTCGCCTTGCTCGGTCACCCTGCCGGGTCGCCTTGCCGAGTCGCCTTGCTGTGTCGCCCTGCTGTGTCACCCTGCTGTGTCACCCTGCTGGGTAGCCTTGCTGAGTCGCCCTGCTGGGTAGCCCTGCTGAGTCGCCCTGCTGGGTCGCCCTGCTGGGTCGCCCTGCTGGGTCGCCCTGCTGGGTCGCCCTGCTGAGTCGCCCTGCTGTGTCGCCCTGCTGGGTCGCCCTGCTGTGTCGCCCTGCTGTGTCACCCTGCTGGGTCGCCCTGCTGTGTCGCCCTGCTGAGTCGCCCTGCTGGGTCACCCTGCTGGGTCACCCTGCTGGGTCGCCCTGCTGTGTCACCCTGCTGAGTCGCCCTGCTGTGTCGCCCTGCTGGGTCACCCTGCTGGGTCGCCCTGCTGTGTCTTTTTTAtaaagtatattaaaacaattTTAAATTCAAGAATCTGTCTCGAAGGCAATGTGTATCCGTCCAAGTTTGCAGGTATTGCATTCTATTAGTTCCACGTTCTCACACTTTAAGGAAGGAGACCCTCTGAAACACTAAACATACTTAAAGCTGATAATGTTACAATGCATGTTTTGTGTGCACCCCCTGAATTGGATGCTGTCTGTGTTCACCCCCTGAATTGGATGCTGTCTGTGTTCACCCCCTGAATTGAATGCTGTCTGTGTGCACCCCCTGAATTGAATGCTGTCTGTGTGCACCCCCTGAATTGAATGCTGTCTGTGTTCACCCCCTGAATTTAATGCTGTCTGTGTGCACCCCCTGAATTGTTTTAATGTGTGTGGTGATGTGGCAACCAATGGACAGCTGTTGCTTTTCAATCATTACGACATTAATGACTGCCAGGAAGTTAACTTGTTTGGTTCTGTAAAAACGTATGTTTGTGTGCCATTGGAGCCCAGTAAGACACTACTAACCAAGCCAGAAAGACACAGGCCGTATTTTGTATTTAATGTGAGTTTAATTTCAGCCCCTGGCTTTTGGCATGGCTTTGGCCCAATCATTCACACTGGTGTATCACTGGAATCCATTTAACTAATGAAACTAACAAAGCAAGGTCTGGCCTCATTTTTAATTGCCCAAATTTGACAACATGTTTGacatgtatgacacttgtatatTTTAAATTGTCATAGGTTGTTTTTAAAGGGATGCTTCTGGactttggcaatgaggccctttttATCTATTTAACCAGAGTCATACTGGACACAAAGACATAACATGGGGTCCACCAGTTCATCTGATGCTGGGGAAGTAGATCTTGAAGTATCCTTTTAAAAAGCTGCTAATGAATAGTTTTGAAATGATTATCAGTCATTTCTTATGATGTATTAATTGATTTGTTAATTATTCTTTTGCTAGATTTTAAGATGTGTTTTTTGCATCCTTTACAAGGAAagtaacattataaatatttacTTAAAATGAACTTGGCACAGATAGAAGTTCAACAAAACCTTTGATTCCGGTTACTGGCCTTTTTGGAAGATTAAGATGGGAGACACTAGACAGTTAGTTTATTGGCTCAgtttctctcccgctctctctgtctctctgtgtgtgtgtgcgtgtgtctaacTGCGGTCTAGTTGGCACCCGCTCTTCTAAATCCTGTCCAGTTGAAACAGGTTAGCGTGAATACTGGTCTTTTGGTTTACCCTGTCTTGTCTTGATCCTGGAGTTTTCCACTGAACTCGTGTTTACCCCCAGAGACTATGGGCAATTGTCTGAATAACTTTTCCAAACTTGGTACACTAGACTATACTTCACAGAGAAAGCCCATTCTGAATGGGTATCCGGCAGTAGCCATGGTACAGGTATGCTTCTCAAACGGTGCCCTATTCCTActcaaaagtagtgtgctatcTAGGGAATAAGGGTGCCAGTTGGGAAACGCCCACAGAGGCGAGTGTTAGAGTCTTGCCACCAATCGACAGGTGTAAGGCTTTTTATTGCTTGTAAGCAAGAACAGTCTCGGTCCGTTCATGTGCCGGTACACTGTGTGCTCACACAAAAGTGTTATGTTGAAATAGATTACCCCaatgttttatattttctttTGTTTGAATTTGATGCACAGTGCACACGCGTGAAATGGTTTACATTAATTAGCGGTATAGTAGGATGCAGTTTAAAGGTGACATTTCTACATATTACAGAATCTTTGCACATGCTGTTATGACTTTGGCAATATTGATTGTGTTCTTTCATTCAGGTCTGGTGTTATTATATTCTGTTATTATATTCTTGGTTAGAGAACAATGTTTGTCTTTCGGTAGGGAAAACCACATCAATAAAGACATGGGGG
>TU1797596
CTTGCTGGGTCGCCTTGCTGGGTCACCCTGCTGGGTCGCCTTGCTGGGTCACCCTGCTGGGTCGCCTTGCTGGGTCACCCTGCTGGGTCGCCTTGCTGGGTCACCCTGCCGGGTCGCCTTGCCGGGTCGCCTTGCCGGGTCGCCTTGCTCGGTCACCCTGCCGGGTCGCCTTGCCGAGTCGCCTTGCTGTGTCGCCCTGCTGTGTCACCCTGCTGTGTCACCCTGCTGGGTAGCCTTGCTGAGTCGCCCTGCTGGGTAGCCCTGCTGAGTCGCCCTGCTGGGTCGCCCTGCTGGGTCGCCCTGCTGGGTCGCCCTGCTGGGTCGCCCTGCTGAGTCGCCCTGCTGTGTCGCCCTGCTGGGTCGCCCTGCTGTGTCACCCTGCTGGGTCGCCCTGCTGTGTCACCCTGCTGAGTCGCCCTGCTGTGTCGCCCTGCTGGGTCACCCTGCTGGGTCGCCCTGCTGTGTCTTTTTTAtaaagtatattaaaacaattTTAAATTCAAGAATCTGTCTCGAAGGCAATGTGTATCCGTCCAAGTTTGCAGGTATTGCATTCTATTAGTTCCACGTTCTCACACTTTAAGGAAGGAGACCCTCTGAAACACTAAACATACTTAAAGCTGATAATGTTACAATGCATGTTTTGTGTGCACCCCCTGAATTGGATGCTGTCTGTGTTCACCCCCTGAATTGGATGCTGTCTGTGTTCACCCCCTGAATTGAATGCTGTCTGTGTGCACCCCCTGAATTGAATGCTGTCTGTGTGCACCCCCTGAATTGAATGCTGTCTGTGTTCACCCCCTGAATTTAATGCTGTCTGTGTGCACCCCCTGAATTGTTTTAATGTGTGTGGTGATGTGGCAACCAATGGACAGCTGTTGCTTTTCAATCATTACGACATTAATGACTGCCAGGAAGTTAACTTGTTTGGTTCTGTAAAAACGTATGTTTGTGTGCCATTGGAGCCCAGTAAGACACTACTAACCAAGCCAGAAAGACACAGGCCGTATTTTGTATTTAATGTGAGTTTAATTTCAGCCCCTGGCTTTTGGCATGGCTTTGGCCCAATCATTCACACTGGTGTATCACTGGAATCCATTTAACTAATGAAACTAACAAAGCAAGGTCTGGCCTCATTTTTAATTGCCCAAATTTGACAACATGTTTGacatgtatgacacttgtatatTTTAAATTGTCATAGGTTGTTTTTAAAGGGATGCTTCTGGactttggcaatgaggccctttttATCTATTTAACCAGAGTCATACTGGACACAAAGACATAACATGGGGTCCACCAGTTCATCTGATGCTGGGGAAGTAGATCTTGAAGTATCCTTTTAAAAAGCTGCTAATGAATAGTTTTGAAATGATTATCAGTCATTTCTTATGATGTATTAATTGATTTGTTAATTATTCTTTTGCTAGATTTTAAGATGTGTTTTTTGCATCCTTTACAAGGAAagtaacattataaatatttacTTAAAATGAACTTGGCACAGATAGAAGTTCAACAAAACCTTTGATTCCGGTTACTGGCCTTTTTGGAAGATTAAGATGGGAGACACTAGACAGTTAGTTTATTGGCTCAgtttctctcccgctctctctgtctctctgtgtgtgtgtgcgtgtgtctaacTGCGGTCTAGTTGGCACCCGCTCTTCTAAATCCTGTCCAGTTGAAACAGGTTAGCGTGAATACTGGTCTTTTGGTTTACCCTGTCTTGTCTTGATCCTGGAGTTTTCCACTGAACTCGTGTTTACCCCCAGAGACTATGGGCAATTGTCTGAATAACTTTTCCAAACTTGGTACACTAGACTATACTTCACAGAGAAAGCCCATTCTGAATGGGTATCCGGCAGTAGCCATGGTACAGGTATGCTTCTCAAACGGTGCCCTATTCCTActcaaaagtagtgtgctatcTAGGGAATAAGGGTGCCAGTTGGGAAACGCCCACAGAGGCGAGTGTTAGAGTCTTGCCACCAATCGACAGGTGTAAGGCTTTTTATTGCTTGTAAGCAAGAACAGTCTCGGTCCGTTCATGTGCCGGTACACTGTGTGCTCACACAAAAGTGTTATGTTGAAATAGATTACCCCaatgttttatattttctttTGTTTGAATTTGATGCACAGTGCACACGCGTGAAATGGTTTACATTAATTAGCGGTATAGTAGGATGCAGTTTAAAGGTGACATTTCTACATATTACAGAATCTTTGCACATGCTGTTATGACTTTGGCAATATTGATTGTGTTCTTTCATTCAGGTCTGGTGTTATTATATTCTGTTATTATATTCTTGGTTAGAGAACAATGTTTGTCTTTCGGTAGGGAAAACCACATCAATAAAGACATGGGGG

Function

NR:

description
PREDICTED: von Willebrand factor A domain-containing protein 5A isoform X20

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1797595 False 2457 lncRNA 0.47 2 62380823 62383395
TU1797596 True 2379 lncRNA 0.46 3 62380823 62383395

Neighbor

gene id symbol gene type direction distance location
LOC118941001 NA coding downstream 282056 62043360 ~ 62098767 (-)
LOC118941000 NA coding downstream 344896 62018416 ~ 62035927 (-)
LOC110496668 brp16 coding downstream 412242 61957953 ~ 61968581 (-)
LOC110496666 LOC106588964 coding downstream 513148 61859719 ~ 61867675 (-)
hsf1a hsf1a coding downstream 552246 61797012 ~ 61828577 (-)
zgc:63863 LOC106588987 coding upstream 1283 62384678 ~ 62407274 (-)
cfap20 cfap20 coding upstream 52420 62435815 ~ 62441111 (-)
LOC110496675 LOC106570403 coding upstream 488593 62871988 ~ 62875096 (-)
LOC110496677 LOC106593246 coding upstream 497097 62880492 ~ 62883071 (-)
LOC118941226 NA coding upstream 499128 62882523 ~ 62882641 (-)
G1571177 NA non-coding downstream 7579 62373011 ~ 62373244 (-)
G1571176 NA non-coding downstream 7898 62372724 ~ 62372925 (-)
G1571175 NA non-coding downstream 8284 62372211 ~ 62372539 (-)
G1571174 NA non-coding downstream 8847 62371688 ~ 62371976 (-)
G1571168 NA non-coding downstream 18057 62362564 ~ 62362766 (-)
G1571443 LOC105012509 non-coding upstream 100393 62483788 ~ 62483996 (-)
G1571449 NA non-coding upstream 106960 62490355 ~ 62490643 (-)
G1571454 NA non-coding upstream 113124 62496519 ~ 62496756 (-)
G1571461 NA non-coding upstream 125602 62508997 ~ 62509600 (-)
G1571468 NA non-coding upstream 133145 62516540 ~ 62516798 (-)
G1570695 NA other downstream 714913 61665328 ~ 61665910 (-)
elp2 elp2 other downstream 1057002 61267281 ~ 61323861 (-)
G1570468 NA other downstream 1087672 61291304 ~ 61293151 (-)
G1569439 NA other downstream 1686724 60693378 ~ 60694099 (-)
LOC110496651 NA other downstream 1764531 60610487 ~ 60642154 (-)
G1572487 NA other upstream 1052403 63435798 ~ 63491169 (-)
G1573054 NA other upstream 1630384 64013779 ~ 64014965 (-)
LOC110496680 LOC106589004 other upstream 1799563 64017203 ~ 64244837 (-)
G1573887 NA other upstream 2586896 64970291 ~ 64971167 (-)
G1575088 NA other upstream 2926648 65310043 ~ 65311051 (-)

Expression


Co-expression Network