G1571201


Basic Information

Item Value
gene id G1571201
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 62418728 ~ 62473094 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1797647
ggcaagtcagttaagaacaaattcttattttcaatgacggcctaggaactgcctgttcaggggcagaacaacagatttgtatcttgtcagctcggggatttgatctagcaacctttcagctaCTAATTCAatgctcgaaccactaggctacctgccgattagaaatgatgcagacaattacattgatagattGCATAatatatctgcaatattaaagctgatctaccctctaaataaatacatacaaatcACACTGCATTGTAt

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1797647 True 264 lncRNA 0.38 2 62418728 62473094

Neighbor

gene id symbol gene type direction distance location
LOC110496670 LOC106588981 coding upstream 270190 62144489 ~ 62148538 (+)
LOC110496875 LOC106588980 coding upstream 408988 61994622 ~ 62009740 (+)
recql4 recql4 coding upstream 426931 61967906 ~ 61991797 (+)
LOC110496665 bop1 coding upstream 495813 61827912 ~ 61922915 (+)
LOC118941200 LOC106588959 coding upstream 629919 61774658 ~ 61788809 (+)
LOC110496878 LOC106588982 coding downstream 10413 62483507 ~ 62484818 (+)
LOC110496879 LOC106588990 coding downstream 28937 62502031 ~ 62570890 (+)
LOC110496880 dennd3 coding downstream 106650 62579744 ~ 62624967 (+)
LOC110496881 LOC106588992 coding downstream 160953 62634047 ~ 62869394 (+)
LOC118941002 NA coding downstream 1890530 64363624 ~ 64364283 (+)
G1571133 NA non-coding upstream 42643 62375700 ~ 62376085 (+)
G1571131 NA non-coding upstream 44261 62373828 ~ 62374467 (+)
G1571128 NA non-coding upstream 49326 62369124 ~ 62369402 (+)
G1571123 NA non-coding upstream 69212 62349247 ~ 62349516 (+)
G1571122 NA non-coding upstream 72807 62345719 ~ 62345921 (+)
G1571228 NA non-coding downstream 9585 62482679 ~ 62482904 (+)
G1571234 NA non-coding downstream 16571 62489665 ~ 62490105 (+)
G1571236 NA non-coding downstream 21927 62495021 ~ 62495274 (+)
G1571238 NA non-coding downstream 24968 62498062 ~ 62498270 (+)
G1571059 NA other upstream 156511 62261624 ~ 62262217 (+)
G1569099 NA other upstream 1802434 60609948 ~ 60616294 (+)
cdk6 cdk6 other upstream 2086428 60256707 ~ 60351422 (+)
G1568568 NA other upstream 2513524 59904164 ~ 59905204 (+)
G1571298 LOC106570403 other downstream 398875 62871969 ~ 62875067 (+)
G1573779 NA other downstream 2428074 64901168 ~ 64902474 (+)
G1573889 LOC106589019 other downstream 2500760 64973854 ~ 64975933 (+)

Expression


Co-expression Network