Gene
RNA
| Item | Value |
|---|---|
| gene id | G1571228 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 62482679 ~ 62482904 (+) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1797682 | True | 226 | lncRNA | 0.50 | 1 | 62482679 | 62482904 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496877 | LOC106588989 | coding | upstream | 8397 | 62451402 ~ 62474282 (+) |
| LOC110496672 | LOC106588986 | coding | upstream | 47546 | 62407415 ~ 62435133 (+) |
| LOC110496670 | LOC106588981 | coding | upstream | 334141 | 62144489 ~ 62148538 (+) |
| LOC110496875 | LOC106588980 | coding | upstream | 472939 | 61994622 ~ 62009740 (+) |
| recql4 | recql4 | coding | upstream | 490882 | 61967906 ~ 61991797 (+) |
| LOC110496878 | LOC106588982 | coding | downstream | 603 | 62483507 ~ 62484818 (+) |
| LOC110496879 | LOC106588990 | coding | downstream | 19127 | 62502031 ~ 62570890 (+) |
| LOC110496880 | dennd3 | coding | downstream | 96840 | 62579744 ~ 62624967 (+) |
| LOC110496881 | LOC106588992 | coding | downstream | 151143 | 62634047 ~ 62869394 (+) |
| LOC118941002 | NA | coding | downstream | 1880720 | 64363624 ~ 64364283 (+) |
| G1571201 | NA | non-coding | upstream | 9585 | 62418728 ~ 62473094 (+) |
| G1571224 | NA | non-coding | upstream | 16170 | 62466108 ~ 62466509 (+) |
| G1571133 | NA | non-coding | upstream | 106594 | 62375700 ~ 62376085 (+) |
| G1571131 | NA | non-coding | upstream | 108212 | 62373828 ~ 62374467 (+) |
| G1571128 | NA | non-coding | upstream | 113277 | 62369124 ~ 62369402 (+) |
| G1571234 | NA | non-coding | downstream | 6761 | 62489665 ~ 62490105 (+) |
| G1571236 | NA | non-coding | downstream | 12117 | 62495021 ~ 62495274 (+) |
| G1571238 | NA | non-coding | downstream | 15158 | 62498062 ~ 62498270 (+) |
| G1571283 | NA | non-coding | downstream | 115359 | 62598263 ~ 62598765 (+) |
| G1571059 | NA | other | upstream | 220462 | 62261624 ~ 62262217 (+) |
| G1569099 | NA | other | upstream | 1866385 | 60609948 ~ 60616294 (+) |
| cdk6 | cdk6 | other | upstream | 2150379 | 60256707 ~ 60351422 (+) |
| G1568568 | NA | other | upstream | 2577475 | 59904164 ~ 59905204 (+) |
| G1571298 | LOC106570403 | other | downstream | 389065 | 62871969 ~ 62875067 (+) |
| G1573779 | NA | other | downstream | 2418264 | 64901168 ~ 64902474 (+) |
| G1573889 | LOC106589019 | other | downstream | 2490950 | 64973854 ~ 64975933 (+) |
