G1571238


Basic Information

Item Value
gene id G1571238
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 62498062 ~ 62498270 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1797692
atgtacagatagccagggggactccaaaactcagacataagtatacaaacaaaacatttgtgtttagtgagtgtaccagatcagaggcagtagggatgcccagggatgttctcttgataagtgtgtgaattagaccatttttctgtcctgctaagcattcaaatgtaacgagtacttttgggtgtcagggaaaatgtatggagtaacaa

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1797692 True 209 lncRNA 0.41 1 62498062 62498270

Neighbor

gene id symbol gene type direction distance location
LOC110496878 LOC106588982 coding upstream 13410 62483507 ~ 62484818 (+)
LOC110496877 LOC106588989 coding upstream 23780 62451402 ~ 62474282 (+)
LOC110496672 LOC106588986 coding upstream 62929 62407415 ~ 62435133 (+)
LOC110496670 LOC106588981 coding upstream 349524 62144489 ~ 62148538 (+)
LOC110496875 LOC106588980 coding upstream 488322 61994622 ~ 62009740 (+)
LOC110496879 LOC106588990 coding downstream 3761 62502031 ~ 62570890 (+)
LOC110496880 dennd3 coding downstream 81474 62579744 ~ 62624967 (+)
LOC110496881 LOC106588992 coding downstream 135777 62634047 ~ 62869394 (+)
LOC118941002 NA coding downstream 1865354 64363624 ~ 64364283 (+)
wdyhv1 wdyhv1 coding downstream 2144115 64642385 ~ 64644137 (+)
G1571236 NA non-coding upstream 2788 62495021 ~ 62495274 (+)
G1571234 NA non-coding upstream 7957 62489665 ~ 62490105 (+)
G1571228 NA non-coding upstream 15158 62482679 ~ 62482904 (+)
G1571201 NA non-coding upstream 24968 62418728 ~ 62473094 (+)
G1571283 NA non-coding downstream 99993 62598263 ~ 62598765 (+)
G1571292 NA non-coding downstream 123645 62621915 ~ 62623066 (+)
G1571279 NA non-coding downstream 123904 62622174 ~ 62624038 (+)
G1571301 NA non-coding downstream 138348 62636618 ~ 62636838 (+)
G1571305 NA non-coding downstream 144333 62642603 ~ 62642811 (+)
G1571059 NA other upstream 235845 62261624 ~ 62262217 (+)
recql4 recql4 other upstream 524320 61967906 ~ 61991797 (+)
G1569099 NA other upstream 1881768 60609948 ~ 60616294 (+)
cdk6 cdk6 other upstream 2165762 60256707 ~ 60351422 (+)
G1571298 LOC106570403 other downstream 373699 62871969 ~ 62875067 (+)
G1573779 NA other downstream 2402898 64901168 ~ 64902474 (+)
G1573889 LOC106589019 other downstream 2475584 64973854 ~ 64975933 (+)
G1573958 NA other downstream 2595750 65094020 ~ 65095356 (+)

Expression


Co-expression Network