G1571461


Basic Information

Item Value
gene id G1571461
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 62508997 ~ 62509600 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1797936
gagagagagagagagagagggagaaagacagtgagtggagggagagagagagagagaaagagagagagggagaaagacagtgagtggagggagagagagagagagggggaaagacagTGAGTGGAGggagctaagagagagagagaggggaaagacagtgagtggagggagagagagagagagagggagaaagacagtgagtggaaagagagagagagagagagagagagaaagagagagggagaaagagagagagagggagaaagacagtgagtggagagagagagagagaaagacagtgagtggagagagagagagggagaaagacagtaagtggagagagagagagagagagagagggagaaagacagtgagtggagagagagagagagggagaaagacagtgagtggagagagagagagagagggagaaagagagagggagaaagagagtgagtggagagggagagagagagggaaaaagagagggggagaaagagagtgagtggagggagagagagagaaagag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1797936 True 529 lncRNA 0.51 2 62508997 62509600

Neighbor

gene id symbol gene type direction distance location
cfap20 cfap20 coding downstream 67886 62435815 ~ 62441111 (-)
zgc:63863 LOC106588987 coding downstream 101723 62384678 ~ 62407274 (-)
LOC118941001 NA coding downstream 410230 62043360 ~ 62098767 (-)
LOC118941000 NA coding downstream 473070 62018416 ~ 62035927 (-)
LOC110496668 brp16 coding downstream 540416 61957953 ~ 61968581 (-)
LOC110496675 LOC106570403 coding upstream 362388 62871988 ~ 62875096 (-)
LOC110496677 LOC106593246 coding upstream 370892 62880492 ~ 62883071 (-)
LOC118941226 NA coding upstream 372923 62882523 ~ 62882641 (-)
LOC110496678 LOC106588996 coding upstream 379749 62889349 ~ 62903227 (-)
csmd3b LOC106588997 coding upstream 423635 62933235 ~ 63759722 (-)
G1571454 NA non-coding downstream 12241 62496519 ~ 62496756 (-)
G1571449 NA non-coding downstream 18354 62490355 ~ 62490643 (-)
G1571443 LOC105012509 non-coding downstream 25001 62483788 ~ 62483996 (-)
G1571156 NA non-coding downstream 125602 62380823 ~ 62383395 (-)
G1571177 NA non-coding downstream 135753 62373011 ~ 62373244 (-)
G1571468 NA non-coding upstream 6940 62516540 ~ 62516798 (-)
G1571441 LOC106588990 non-coding upstream 59029 62568629 ~ 62572665 (-)
G1571501 NA non-coding upstream 75564 62585164 ~ 62585463 (-)
G1571504 dennd3 non-coding upstream 77441 62587041 ~ 62587276 (-)
G1571505 NA non-coding upstream 82503 62592103 ~ 62592331 (-)
G1570695 NA other downstream 843087 61665328 ~ 61665910 (-)
elp2 elp2 other downstream 1185176 61267281 ~ 61323861 (-)
G1570468 NA other downstream 1215846 61291304 ~ 61293151 (-)
G1569439 NA other downstream 1814898 60693378 ~ 60694099 (-)
LOC110496651 NA other downstream 1892705 60610487 ~ 60642154 (-)
G1572487 NA other upstream 926198 63435798 ~ 63491169 (-)
G1573054 NA other upstream 1504179 64013779 ~ 64014965 (-)
LOC110496680 LOC106589004 other upstream 1673358 64017203 ~ 64244837 (-)
G1573887 NA other upstream 2460691 64970291 ~ 64971167 (-)
G1575088 NA other upstream 2800443 65310043 ~ 65311051 (-)

Expression


Co-expression Network