G1571283


Basic Information

Item Value
gene id G1571283
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 62598263 ~ 62598765 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1797740
acattttgtcaggaaatgcaactccgtctcaggttctgctgttgtgcagtggttgcacagcctttcctctacagggagccaggttttcctgtgtctacccttctcaatggcaaggctgtgctcactgagcctgtgctttgtcaaggtttttctaaggttttgatcagtaaccatggtcaaatagttagccacggtgtactgtcgatttagggccagatagcactgcattttgctttgtgtttgtgcttgtgtttcccaaaaagcaatgtagttttgttttgactgtgttgtaatttggtttatcctgattgattgaatgttctggtcctgaggcctcagtgtgttagtagaac

Function

NR:

description
PREDICTED: uncharacterized protein LOC104955046

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1797740 True 353 lncRNA 0.44 2 62598263 62598765

Neighbor

gene id symbol gene type direction distance location
LOC110496879 LOC106588990 coding upstream 27373 62502031 ~ 62570890 (+)
LOC110496878 LOC106588982 coding upstream 113611 62483507 ~ 62484818 (+)
LOC110496877 LOC106588989 coding upstream 123981 62451402 ~ 62474282 (+)
LOC110496672 LOC106588986 coding upstream 163130 62407415 ~ 62435133 (+)
LOC110496670 LOC106588981 coding upstream 449725 62144489 ~ 62148538 (+)
LOC110496881 LOC106588992 coding downstream 35282 62634047 ~ 62869394 (+)
LOC118941002 NA coding downstream 1764859 64363624 ~ 64364283 (+)
wdyhv1 wdyhv1 coding downstream 2043620 64642385 ~ 64644137 (+)
LOC118941003 LOC106570377 coding downstream 2109602 64708367 ~ 64721281 (+)
LOC110496687 fusip coding downstream 2135444 64734209 ~ 64741683 (+)
G1571238 NA non-coding upstream 99993 62498062 ~ 62498270 (+)
G1571236 NA non-coding upstream 102989 62495021 ~ 62495274 (+)
G1571234 NA non-coding upstream 108158 62489665 ~ 62490105 (+)
G1571228 NA non-coding upstream 115359 62482679 ~ 62482904 (+)
G1571292 NA non-coding downstream 23150 62621915 ~ 62623066 (+)
G1571279 NA non-coding downstream 23409 62622174 ~ 62624038 (+)
G1571301 NA non-coding downstream 37853 62636618 ~ 62636838 (+)
G1571305 NA non-coding downstream 43838 62642603 ~ 62642811 (+)
G1571312 NA non-coding downstream 58646 62657411 ~ 62657638 (+)
LOC110496880 dennd3 other upstream 13206 62579744 ~ 62624967 (+)
G1571059 NA other upstream 336046 62261624 ~ 62262217 (+)
recql4 recql4 other upstream 624521 61967906 ~ 61991797 (+)
G1569099 NA other upstream 1981969 60609948 ~ 60616294 (+)
G1571298 LOC106570403 other downstream 273204 62871969 ~ 62875067 (+)
G1573779 NA other downstream 2302403 64901168 ~ 64902474 (+)
G1573889 LOC106589019 other downstream 2375089 64973854 ~ 64975933 (+)
G1573958 NA other downstream 2495255 65094020 ~ 65095356 (+)
LOC110496708 srsf4 other downstream 3185298 65780334 ~ 65798684 (+)

Expression


Co-expression Network