Gene
RNA
| Item | Value |
|---|---|
| gene id | G1571559 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 62689082 ~ 62689533 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1798050 | True | 452 | lncRNA | 0.52 | 1 | 62689082 | 62689533 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| cfap20 | cfap20 | coding | downstream | 247971 | 62435815 ~ 62441111 (-) |
| zgc:63863 | LOC106588987 | coding | downstream | 281808 | 62384678 ~ 62407274 (-) |
| LOC118941001 | NA | coding | downstream | 590315 | 62043360 ~ 62098767 (-) |
| LOC118941000 | NA | coding | downstream | 653155 | 62018416 ~ 62035927 (-) |
| LOC110496668 | brp16 | coding | downstream | 720501 | 61957953 ~ 61968581 (-) |
| LOC110496675 | LOC106570403 | coding | upstream | 182455 | 62871988 ~ 62875096 (-) |
| LOC110496677 | LOC106593246 | coding | upstream | 190959 | 62880492 ~ 62883071 (-) |
| LOC118941226 | NA | coding | upstream | 192990 | 62882523 ~ 62882641 (-) |
| LOC110496678 | LOC106588996 | coding | upstream | 199816 | 62889349 ~ 62903227 (-) |
| csmd3b | LOC106588997 | coding | upstream | 243702 | 62933235 ~ 63759722 (-) |
| G1571548 | NA | non-coding | downstream | 16664 | 62672196 ~ 62672418 (-) |
| G1571545 | NA | non-coding | downstream | 25361 | 62663468 ~ 62663721 (-) |
| G1571541 | NA | non-coding | downstream | 34715 | 62653925 ~ 62654367 (-) |
| G1571523 | NA | non-coding | downstream | 66206 | 62621844 ~ 62622876 (-) |
| G1571519 | NA | non-coding | downstream | 71268 | 62616348 ~ 62617814 (-) |
| G1571563 | NA | non-coding | upstream | 3334 | 62692867 ~ 62693105 (-) |
| G1571566 | NA | non-coding | upstream | 6332 | 62695865 ~ 62696272 (-) |
| G1571567 | NA | non-coding | upstream | 6843 | 62696376 ~ 62696668 (-) |
| G1571568 | NA | non-coding | upstream | 7880 | 62697413 ~ 62698252 (-) |
| G1571573 | NA | non-coding | upstream | 16317 | 62705850 ~ 62706218 (-) |
| G1570695 | NA | other | downstream | 1023172 | 61665328 ~ 61665910 (-) |
| elp2 | elp2 | other | downstream | 1365261 | 61267281 ~ 61323861 (-) |
| G1570468 | NA | other | downstream | 1395931 | 61291304 ~ 61293151 (-) |
| G1569439 | NA | other | downstream | 1994983 | 60693378 ~ 60694099 (-) |
| LOC110496651 | NA | other | downstream | 2072790 | 60610487 ~ 60642154 (-) |
| G1572487 | NA | other | upstream | 746265 | 63435798 ~ 63491169 (-) |
| G1573054 | NA | other | upstream | 1324246 | 64013779 ~ 64014965 (-) |
| LOC110496680 | LOC106589004 | other | upstream | 1493425 | 64017203 ~ 64244837 (-) |
| G1573887 | NA | other | upstream | 2280758 | 64970291 ~ 64971167 (-) |
| G1575088 | NA | other | upstream | 2620510 | 65310043 ~ 65311051 (-) |
