XLOC_003485 (mon1bb)


Basic Information

Item Value
gene id XLOC_003485
gene name mon1bb
gene type coding
species zebrafish (Danio rerio)
category of species model fish

Chromosome Information

Item Value
chromosome id NC_007122.7
NCBI id CM002895.2
chromosome length 45484837
location 25693395 ~ 25709311 (+)
genome version GRCz11_2017_zebrafish_Genome

Sequence

>TCONS_00006836
GGTTGTGGATATTTGTTTTGCAGTGTTTTAACGTCCAGCTTCCTGGAGGGAGCACCGGCAGCAGAGCTGAGTCAGTTGCGCTGAACGAAAGCGAAAGATGATTTTGCATTTAAATCATCGTTGATAATTTAATATATCAGACATGAATGTGATTGTGAGCAGAAGGAAAGCGCTTCACGAGAGCAGTCATTTATCGAGAGACTTCATGAGCTTTTCGCACAAATGACGTAGACGAGCTCAAGTTACTGTGTTGTTGTAATCTGCTCAGGACCTCTGTGATTTAACCAGCTTTTATTATTTGACAAATCGCGATTTATCGCTATTAAACTATCAGAAGACGTGCGTGACGGACGCTGCAGATATGGGATAACAGCAGTAATCTGATTAAACGGCTTCAGACTATAATTTTGTATATTAAGTACAAACCTTTAGTCATTAAAATTGCTTCGCTGATTTATTTGTCATCTTATAAGTGTTTTAAGCCAGTTTCTCATCATAAATGCAGCTGTTTGCATGTTGACATGGATCACAACGGTCAAGAGAGTGGGAATATGGAGGAGGTGAAGATATGTGATCCATCAATCCTTCCTCAATGTCCTGATCACACAGACACTGACGTCCCATCTGAAAACCATTGTGTGAATGAAGATCACAGGACGCCTTCAGACCCAGAGGGGCTTTTGGAGTCAGCAGATCATTCATCCGAGCAGGACGTCCTACCACAAGAGCCTTCAACAGAAATGCAGAAGCTCCATGTTGAGGATGACCGTTCTCTGTGTCCCGGCGGTTCAGAGACGGATTCTGGGAAAGCATCCCAAGACTCTGCATTAGTGGATAATAGCAATGATGACTCTGGTGAGTTTGTTGTAACTGTTTTAGCTCGGGGGAAGATGGAAGAGCAGGGAATGGGCATGAAAGGAGCCTCGTCCCCTTTGTCCGAGACCGGCACACCTCTGGGACCCCCGTCACACAGGAACGAGGACGTGACAGCGGATAGTTGGAGGCAGCACAGGAAGCATGTGTTCGTGTTGAGTGAGGCAGGGAAGCCTATCTATTCCCGATACGGAAGTGAGGAGGCTCTTTCATCCACCATGGGGGTGATGATGGCTCTGGTGTCATTCGTGCAAAGTGGAGACAACATCATTCGTTCTGTTTACTCTGATGAGCACACAGTGGTGTTCATGCAGCGTGGTCCTCTGGTTCTGGTGTCCGTGTCCTGCAGCCGTCAGTCCGAGCAGCAGCTCCGCAACGAGCTTGTCTACGTCTACAACCAGATCGTCAGCATGCTCACACAGGCCAGCATTACGCGCATCTTCGAGCACAAGAAGAACTACGACTTGCGCCGCCTGCTGGCCGGTTCCGAGAAGATCCTGGATGGCCTCCTAAACCTGGTGGACTCGGACCCCAGTTTCTTACTCTGCGCCGTCCACTGTCTCCCCTTAGCTTCATCTCTCAGGGACTCCCTCAGTCAGATCCTTCAGAAGGCCATCACACCAAACTTGGTCTTCTCCATCCTCATAGCAAAGAACCAGCTGCTGACCATAGTTCAGGAGAAGATGGTCATTGATGATGCCCGACTGGAGCCGGCCGACCTCCATCTTCTGCTAAACCTTATTGGAGCCTCGTCCGCCTTTCAGGCCGGGGAAATCTGGACACCCATCTGCTTGCCCAGTTTTAACCCTGACTGTTATTTTTATGCCTACATCTCCTATTTGGACCCTCCTGAATGTACTGTTTGTCTGGTTCTTCTCTCCACTGATAAAGAGGCCTTTTATTCAGTGGCCGAGTGTAAGAGGAAGATTGAGGAGGCTATGCAAACACAGAATGCGCTCAAGTCCATAGCGAAGGCTCAGTCGTACAGCGTCAGTCAGGTGGGAGTGTCTGATCTCAGGCATTTCATGTACAAGCCCTTCGACGTGCCCGACAACCATCGccagcttacccagttcaccagCCCAGAGATGGAGGCCCCATACAGCAGTGAAGAGGAGCGGATGAGACTGCTGGACCTGTACAGAGACCTGCACGGACGTATTCACAGCGCTTCACGACCCCTCAAACTCATCTATCATGTGGCTGAACGCGAGACTCTGCTGGCCTGGGTCACGAGCAAATTCGAGCTGTACACGTGCTTCAGTCCCCTCGTCACTAAAACCTGTGCCATCAACGCCATCACTAAACTACTGCGCTGGATCAAGAAAGAGGAAGAGCGTCTGTTCATCCGCTACCCTCCAAAGTACTCCACCACCCCAAACCCCAGCAGGAGCTCCAAAACAGATGCACATTAATCAGACTCATGACAGCATTCAAACCGAACTCACCAGAGATCATTCCACCAACCAGAGGTTCAAATAATGATGTTAAGCGGCTGGATTTGTTGGACCATTTAACAGCATCATCTGGAATGAATCTAGTTTTCTACACTGAAGAAAAGTCATGCACGTTATTTATTCCACACACACAGCATTGATGATGAGCTTTACGTAGCAAAAGAGGCCCAATCATATATAGAGTatggatatatattttttcttctcagcTGGTGGCAGTGGCTGAATATGGAAGCTATAACTGGATTGTTTTTTTGTCATATAATTGCATCTAGATTAGGAAATGTTTATGCTATGAAATGATCAAATTTGGTAAACTGGTTTCTTAATGAAAGAAGACACAAGCTTTTCATCTAAATCAGGGCTTTTCAAGCGATTCTGTGAAAATGTTTGgacaaaaaggctttaaaaataaaacgtttttaataaataaataattatgtttaatacattttatcaagacgtaaagaaataattataaaaatgttctcaaatcatttaaaatatgattaaagtataataaaatgatTCAAATTGATCTCAAATTTGTAATAGTACATAAATTATGCAACTAATAATCCAATAAATACTCCAGACCTGTTTATAATATTACATTAGAGAATATACAAATAAGGATATTTTTGGATAAGGGATGCTAAAAGATTGAAAAGCTCTAGTCTAAACTCTTATCACCGTCACCTTTTCTGCTCGTTCTTTGTATTTGTGATGGAGTTTCCTTTAGTCTTACATGGCTTTGAACTTCAACCCAAACTTAAATAACATATCAGGAGATCATGAATGGTATCTTTAGTATGAGTTAgtgttcttttatttgttttagttgagTGTTGTGTGTGATTTTATTTGTTTCCTGGTCATGATTTATGACATTTTTTCTCTGGCATGTGCACTATGATGtcattgtattataataataagatcAAGACCACCATAACGGGTTAAACCACTGGACTTAATTGGAAAAAATGTATGATATTTGGACAATTACATACTTGCAATTTTTTCTGgaagaaacaaaacaacatttgtaTTGAAGAGGAATAATATATTGGTGCTGTAATAAATCTGAGGTTGCTCAAAGTACATCTTGCATTAATAGCTTTATTTTCCTAAATACTcgcacaacagattaatcaatttTGTTGTTCATAGGTGTTTGTCTGAGTGTGTGCGCGTTTATTTATGACATTGTCACACTTTGCAAAAAGCAAATGTCTTGAAGTCAAAATGCACGTTTTCGAAGCAATATTGCCTGTTTTGTCAATAAAATAGGTTTAAAAGCCAAATCACAATGATTCAGTCATGTATAAACATTTGCTTTTTCTTCTAAATGAATGATTCGTTTGAATGAACGACTCTGTGAATCCCTTTGGCTGCATTTACACCGCATGGTTCAAGTGAAGTAGGGGAGAGCAGAAGGCAAACCATTTTTCATAAAAAACCTATTCCtaaaagata

Function

symbol description
mon1bb Predicted to act upstream of or within protein targeting to vacuole and vesicle-mediated transport. Orthologous to human MON1B (MON1 homolog B, secretory trafficking associated).

GO:

id name namespace
GO:0006623 protein targeting to vacuole biological_process

KEGG: NA

ZFIN:

id description
ZDB-GENE-030131-3790 Predicted to act upstream of or within protein targeting to vacuole and vesicle-mediated transport. Orthologous to human MON1B (MON1 homolog B, secretory trafficking associated).

Ensembl:

ensembl_id ENSDARG00000077434

RNA

RNA id representative length rna type GC content exon number start site end site
TCONS_00006836 True 3809 mRNA 0.42 6 25693395 25709311

Neighbor

gene id symbol gene type direction distance location
XLOC_003484 otud5b coding upstream 3522 25681335 ~ 25689873 (+)
XLOC_003483 grm6b coding upstream 13674 25634041 ~ 25679721 (+)
XLOC_003482 comtb coding upstream 61953 25619892 ~ 25631442 (+)
XLOC_003481 ccdc120 coding upstream 74812 25583950 ~ 25618583 (+)
XLOC_003480 mbd1b coding upstream 117196 25560072 ~ 25576199 (+)
XLOC_003486 si:dkey-183j2.10 coding downstream 26167 25735478 ~ 25750060 (+)
XLOC_003487 NA coding downstream 120059 25829370 ~ 25830337 (+)
XLOC_003488 CR318604.1 coding downstream 368636 26077947 ~ 26078061 (+)
XLOC_003489 NA coding downstream 479206 26188517 ~ 26196145 (+)
XLOC_003490 NA coding downstream 516771 26226082 ~ 26234069 (+)
XLOC_003369 CR854846.2 misc upstream 9570313 16122786 ~ 16123082 (+)
XLOC_003318 CR450764.6 misc upstream 12981399 12711700 ~ 12711996 (+)
XLOC_003317 CR450764.16 misc upstream 12999132 12693967 ~ 12694263 (+)
XLOC_003316 CR450764.11 misc upstream 13007796 12685304 ~ 12685599 (+)
XLOC_003315 CR450764.18 misc upstream 13013367 12679732 ~ 12680028 (+)
XLOC_003467 NA non-coding upstream 427160 25256812 ~ 25266235 (+)
XLOC_003466 NA non-coding upstream 465200 25181857 ~ 25228195 (+)
XLOC_003463 NA non-coding upstream 633297 25059462 ~ 25060098 (+)
XLOC_003447 BX072564.1 non-coding upstream 1112281 24580579 ~ 24581114 (+)
XLOC_003444 AL831791.1 non-coding upstream 1514457 24178823 ~ 24178938 (+)
XLOC_003497 NA non-coding downstream 993646 26702957 ~ 26709080 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000306_03248839_03256675 MON1BB, MON1B coding CI01000306 null 3248839 ~ 3257063 (+)