Gene
RNA
| Item | Value |
|---|---|
| gene id | G1573639 |
| gene name | NA |
| gene type | non-coding |
| species | rainbow trout (Oncorhynchus mykiss) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | NC_048582.1 |
| NCBI id | CM023236.2 |
| chromosome length | 74657750 |
| location | 64543843 ~ 64548859 (-) |
| genome version | USDA_OmykA_1.1_2020_rainbow_trout_Genome |
| description |
|---|
| unnamed protein product |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU1800350 | False | 365 | lncRNA | 0.48 | 2 | 64543843 | 64548859 |
| TU1800351 | False | 365 | lncRNA | 0.48 | 2 | 64543843 | 64548859 |
| TU1800353 | True | 365 | lncRNA | 0.48 | 2 | 64543843 | 64548859 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| LOC110496680 | LOC106589004 | coding | downstream | 299006 | 64017203 ~ 64244837 (-) |
| LOC118941203 | NA | coding | downstream | 517039 | 64024649 ~ 64026804 (-) |
| LOC118941202 | NA | coding | downstream | 570370 | 63937285 ~ 63973473 (-) |
| LOC110496956 | rpl23a | coding | downstream | 578255 | 63965071 ~ 63965588 (-) |
| csmd3b | LOC106588997 | coding | downstream | 784121 | 62933235 ~ 63759722 (-) |
| si:rp71-45k5.4 | LOC106570382 | coding | upstream | 95201 | 64644060 ~ 64648755 (-) |
| LOC110496683 | sdha | coding | upstream | 100263 | 64649122 ~ 64663208 (-) |
| LOC110496685 | dek | coding | upstream | 125000 | 64673859 ~ 64677332 (-) |
| LOC110496684 | kdm1b | coding | upstream | 131344 | 64680203 ~ 64696004 (-) |
| LOC110496688 | LOC106589014 | coding | upstream | 217256 | 64766115 ~ 64769287 (-) |
| G1573471 | NA | non-coding | downstream | 46233 | 64497344 ~ 64497610 (-) |
| G1573470 | NA | non-coding | downstream | 46533 | 64497010 ~ 64497310 (-) |
| G1573467 | NA | non-coding | downstream | 48051 | 64495508 ~ 64495792 (-) |
| G1573466 | NA | non-coding | downstream | 48389 | 64494879 ~ 64495454 (-) |
| G1573465 | NA | non-coding | downstream | 49057 | 64494555 ~ 64494786 (-) |
| G1573671 | NA | non-coding | upstream | 44228 | 64593087 ~ 64593337 (-) |
| G1573673 | NA | non-coding | upstream | 54450 | 64603309 ~ 64603508 (-) |
| G1573685 | NA | non-coding | upstream | 78850 | 64627709 ~ 64627937 (-) |
| G1573696 | NA | non-coding | upstream | 121155 | 64670014 ~ 64670213 (-) |
| G1573702 | NA | non-coding | upstream | 150935 | 64699794 ~ 64699993 (-) |
| G1573054 | NA | other | downstream | 528878 | 64013779 ~ 64014965 (-) |
| G1572487 | NA | other | downstream | 1052674 | 63435798 ~ 63491169 (-) |
| G1570695 | NA | other | downstream | 2877933 | 61665328 ~ 61665910 (-) |
| elp2 | elp2 | other | downstream | 3220022 | 61267281 ~ 61323861 (-) |
| G1573887 | NA | other | upstream | 421432 | 64970291 ~ 64971167 (-) |
| G1575088 | NA | other | upstream | 761184 | 65310043 ~ 65311051 (-) |
| G1575282 | NA | other | upstream | 1248771 | 65797630 ~ 65798675 (-) |
| G1575457 | NA | other | upstream | 1465610 | 66014469 ~ 66053735 (-) |
| G1575475 | NA | other | upstream | 1506823 | 66055682 ~ 66056239 (-) |
