G1573889 (LOC106589019)


Basic Information

Item Value
gene id G1573889
gene name LOC106589019
gene type unknown
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 64973854 ~ 64975933 (+)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1800657
TCACAATCTGTTATACTGACTTACatggacttccagtcattgcaatAACACTGGTTAGCAACTTCACACTGTATGCAGAgacaagttcatctgactgggGAAGGAGATAAAGGCGTAAGGGGGATAttaaaaagggcttcattgccaaaatgcTGAACTAACCCTTTAAATTGTACACATTCAAAGCTGTAGTATCTGAAGTGCTTTGGACTCAACAGGATATTTTTTGCATCATTCCTAACCAAAGGCCAAAGAAAAGTCTGCTTAGGACTGTAGGAATTTAACAGTGGACTGAAATGTTATTTATCGGGCCAATTTCAAATCAAGCATTTGGCAATGATCACATGCTCAATATGCAACTTTGTGCAGACTGAAGTTACATAACCTCTCAAGTCAAAGACTAGAGTCACTCACTGAAGCGCTATTAAAgggatgagtcccaaatggtacaTTAATCCATATATAGtagtcagtggaggctggtgaggggaagACATCTCATGGAAtagcatcaaacacatagaaaccatgtgtttgataccattccaccgattcccctccagccattaccatgagcccttgtcctccccaattatggtgccaccaacctcctatgATAGAGGTGGGGAATGGGgttccatttggaatgcagaaCAGGTATATGTGGCCTTTTCATAAGTCCTCAACAATCTTCCCTTGAGGGGAGTGTTGCTGCTGCTGTAACACAGGAAGTGATGGGGTCAGAGGTGGTGGCTAAACGCTGGGTTAAAGGCTGGGAGGATTCCGTGGGAAGACTTCTAGCCGGCTAAGATTAGCCTGGAGGGTTGGAGCTTGGAACTGACTCTGTGTGGGAGCAGCGTCACAACCATAGAAGAGTCCATAAGCAAATGTTGACATTATACACGAAGAGGCAGCAATGTTGGTGGTTGGTTCTTCAAGCTGTCTGCATTGTAAAACATTGTGGGGTATTTTTCATGTTACTTATTATGTGTGTCCATTGGGAGCAGTGGTTATGACATTCTATTTATCTCAATACTAATTGAATAATTACATGTTAAAGCATACATTGTATTGTGCAACACACTTTTGTCATAGGCCAGTACATGAATGATAATGAAATTAGTTTGTACTTTTGTCATAGGCCAGTACATGAATGATAATGAAATTAGTttgtacaaaaaaaacaaaaaaatcattGAATGAAAAGATGAAGGTGAATCTGTGCCAGCCTAATACAGTCAGCTACAGTGTCTGTCTGGAGTAGATCAACCCTAATTACTTCAGGGTTCAGACCATGTGTTTCAGGTCCTTAAGTCACTTTAGTCCATTAGTGGTAGTGTATCCGTCCGATGGTCCCTGTTCCAGTGGTCAGTATATCTGGCTGTCCGTTCCTCCAGATCTCCCTGACGATGCGTTCCCTGTCCTCCAGTCGTCTCGCCCTCTCCAGCTCCTCCGCCGACGCAAACACATTCACGCTCCTCAAAGTACCGTTCAATTGGCTGTTGCGGTCGCTCATGGGCGCAACCGTCACTTTAGGGAtctctgcctcctccccttcttccacATCCacactctcctcatcctcctcttcttcactgGACTCCTTCAGTTGTCTCCTCTCTGGGGACGGGGGAGGCTTATTGGTACGGCGGGTCCTACAGGTGATGCCGGTGACCAGGAGGCACAGGGCCAGGAGAAGGCCAAAACACACA

Function

NR:

description
protein eva-1 homolog B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1800657 True 1712 TUCP 0.45 2 64973854 64975933

Neighbor

gene id symbol gene type direction distance location
LOC110496693 LOC106589017 coding upstream 652 64946543 ~ 64973202 (+)
LOC110496692 LOC106589016 coding upstream 38113 64843908 ~ 64935741 (+)
LOC110496690 LOC106589012 coding upstream 155760 64777472 ~ 64818094 (+)
LOC110496957 LOC106589002 coding upstream 207950 64761475 ~ 64765904 (+)
LOC100499585 LOC100499585 coding upstream 216266 64748508 ~ 64757588 (+)
LOC110496884 NA coding downstream 23192 64999125 ~ 65004144 (+)
LOC110496886 LOC106589003 coding downstream 32143 65008076 ~ 65011294 (+)
LOC110496696 LOC106589020 coding downstream 37071 65013004 ~ 65028121 (+)
LOC110496697 LOC106589022 coding downstream 66931 65015115 ~ 65046557 (+)
LOC118941205 LOC106589030 coding downstream 217009 65192942 ~ 65223522 (+)
G1573811 NA non-coding upstream 19518 64953986 ~ 64954336 (+)
G1573781 NA non-coding upstream 31843 64941716 ~ 64942011 (+)
G1573807 NA non-coding upstream 43847 64929749 ~ 64930007 (+)
G1573772 NA non-coding upstream 60194 64906936 ~ 64913660 (+)
G1573797 NA non-coding upstream 95358 64878111 ~ 64878496 (+)
G1573907 NA non-coding downstream 21765 64997698 ~ 65007578 (+)
G1573924 NA non-coding downstream 46774 65022707 ~ 65023085 (+)
G1573917 LOC106589023 non-coding downstream 79088 65055021 ~ 65057496 (+)
G1573945 NA non-coding downstream 99856 65075789 ~ 65077582 (+)
G1573779 NA other upstream 71380 64901168 ~ 64902474 (+)
G1571298 LOC106570403 other upstream 2098787 62871969 ~ 62875067 (+)
LOC110496880 dennd3 other upstream 2388797 62579744 ~ 62624967 (+)
LOC110496878 LOC106588982 other upstream 2489784 62483507 ~ 62484818 (+)
G1571059 NA other upstream 2711637 62261624 ~ 62262217 (+)
G1573958 NA other downstream 118087 65094020 ~ 65095356 (+)
LOC110496708 srsf4 other downstream 808130 65780334 ~ 65798684 (+)
LOC110496718 NA other downstream 1246390 66221858 ~ 66228697 (+)
G1574595 NA other downstream 1536793 66512726 ~ 66513074 (+)
G1574728 NA other downstream 1823484 66799417 ~ 66802456 (+)

Expression


Co-expression Network