G1574976


Basic Information

Item Value
gene id G1574976
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 65105527 ~ 65106993 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1802010
GTATTACACAATACACTACTATACCGAACCCTTTTGGAGAAGGCTATtcaatacactactatactgagtccttttggagaaggctattcaatacactactatactgagCCTTTTTGGAGAAGGCTATTCAATATACTACTATACTGAGCCCTTTTGGAGAAGgctattcaatacactactatactgaacccctttggagaaggctattcaatacactactatactgagcccttttggagaaggctattcaatacactactatactgagtccttttggaggctattcaatacactactatactgagtccttttggagaaggctattcaatacactactatactgagcccttttggagaaggctattcaatacactactatactga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1802010 True 384 lncRNA 0.38 3 65105527 65106993

Neighbor

gene id symbol gene type direction distance location
LOC110496694 LOC106589019 coding downstream 117531 64973831 ~ 64987996 (-)
LOC110496691 LOC106589015 coding downstream 272204 64828329 ~ 64833323 (-)
LOC110496688 LOC106589014 coding downstream 336240 64766115 ~ 64769287 (-)
LOC110496684 kdm1b coding downstream 409523 64680203 ~ 64696004 (-)
LOC110496685 dek coding downstream 428195 64673859 ~ 64677332 (-)
LOC110496890 LOC106570358 coding upstream 407949 65514942 ~ 65601901 (-)
LOC110496703 NA coding upstream 503947 65610940 ~ 65620200 (-)
LOC110496706 LOC106589031 coding upstream 648128 65755121 ~ 65767988 (-)
xkr8.3 xkr8 coding upstream 663922 65770915 ~ 65781022 (-)
epb41a LOC106589039 coding upstream 787991 65894984 ~ 66039471 (-)
G1574929 NA non-coding downstream 16920 65037353 ~ 65088607 (-)
G1574962 NA non-coding downstream 23819 65081107 ~ 65081708 (-)
G1574957 NA non-coding downstream 32734 65072457 ~ 65072793 (-)
G1574894 NA non-coding downstream 118673 64986623 ~ 64986854 (-)
G1573886 LOC106589017 non-coding downstream 132334 64971434 ~ 64973193 (-)
G1574995 NA non-coding upstream 36108 65143101 ~ 65143388 (-)
G1574998 NA non-coding upstream 38325 65145318 ~ 65147441 (-)
G1575110 NA non-coding upstream 244183 65351176 ~ 65352246 (-)
G1575152 NA non-coding upstream 329782 65436775 ~ 65437651 (-)
G1575168 NA non-coding upstream 354928 65461921 ~ 65504693 (-)
G1573887 NA other downstream 134360 64970291 ~ 64971167 (-)
LOC110496680 LOC106589004 other downstream 860713 64017203 ~ 64244837 (-)
G1573054 NA other downstream 1090562 64013779 ~ 64014965 (-)
G1572487 NA other downstream 1614358 63435798 ~ 63491169 (-)
G1570695 NA other downstream 3439617 61665328 ~ 61665910 (-)
G1575088 NA other upstream 203050 65310043 ~ 65311051 (-)
G1575282 NA other upstream 690637 65797630 ~ 65798675 (-)
G1575457 NA other upstream 907476 66014469 ~ 66053735 (-)
G1575475 NA other upstream 948689 66055682 ~ 66056239 (-)
ppp1r11 ppp1r11 other upstream 1131105 66238098 ~ 66242725 (-)

Expression


Co-expression Network