G1574998


Basic Information

Item Value
gene id G1574998
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 65145318 ~ 65147441 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1802033
CAGTACATTCACAGGATATCAGTTAGTTCAAGTCGGAAATTGTTTTACTACAAGGAACCTAACAAATCTGTTCAACCGATAGAAGGTTTAACCACAGGCCTAACAAGGAACCTAAGAAATCTCAAATCTCTTCAACCGATAGTAGACTTTCCTACAGGCCTAACAAGGAACCTAACAAACAACCATCTTCTGCTCGTTACCTAAGTAACACAAACATCTTCTGCACGTTACCTAAGTAACAAACATCTTCTGCTCGTTACCTAAGTAACACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATCTTCTACTATTTACCTAAATAACACAAATATCTTCTGCTCGTTACCTAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACACAAACATATTCTGCATGTTGCCTAGTAACACAACCATCTTCTGCATGGTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACACAAACATCTTCTGCATGTTGCCTAGTAACAAACATCTTCTGCTCGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATCTTCTGCATGTTGCCTAAGTAACACAACCATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATCTTCTGCATGTTGCCTAAGTAACACAAACATCTTCTGCATGTTGCCTAATAACACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATATTCTGCATGTTGCCTAAGTAACACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCTCGTTGCCTAAGTAACACAACCATCTTCTGCACGTTGAATAGTAACACAACCATCTCCGTCATGTTGCCTAAGTAACACAACCATCTCCGTCATGTTGCCTAAGTAACACAACCATCTCCGTCATGTTGCCTAAGTAACACAACCATCTTCTGCATGTTGCCTAAGTAACACAACCATCTCCGTCATGTTGCCTAAGTAACACAACCATCTCCGTCATGTTGCCTAGTAACACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTACCTAAGTAACACAAACATCTTCTGCTCGTTGCCTAAGTAACACAAACATCTTCTGCATGTTGCCTAAGTAACACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCTCGTTGCCTAAGTAACAAACATCTTCTGCTCATTGCCTAAGTAACACAAACATCTTCTGCTCGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACACAAACATCTTCTGCATGTTGCCTAGTAACACAAAAATTTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATCTTCTGCATGTTGCCTAAGTAACAAACATCTTCTGCATGTTGCCTAGTAACACAAACATCTTCTGCATGTTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1802033 True 1850 lncRNA 0.39 2 65145318 65147441

Neighbor

gene id symbol gene type direction distance location
LOC110496698 LOC106570363 coding downstream 24262 65056656 ~ 65121056 (-)
LOC110496694 LOC106589019 coding downstream 157322 64973831 ~ 64987996 (-)
LOC110496691 LOC106589015 coding downstream 311995 64828329 ~ 64833323 (-)
LOC110496688 LOC106589014 coding downstream 376031 64766115 ~ 64769287 (-)
LOC110496684 kdm1b coding downstream 449314 64680203 ~ 64696004 (-)
LOC110496890 LOC106570358 coding upstream 367501 65514942 ~ 65601901 (-)
LOC110496703 NA coding upstream 463499 65610940 ~ 65620200 (-)
LOC110496706 LOC106589031 coding upstream 607680 65755121 ~ 65767988 (-)
xkr8.3 xkr8 coding upstream 623474 65770915 ~ 65781022 (-)
epb41a LOC106589039 coding upstream 747543 65894984 ~ 66039471 (-)
G1574995 NA non-coding downstream 1930 65143101 ~ 65143388 (-)
G1574976 NA non-coding downstream 38325 65105527 ~ 65106993 (-)
G1574929 NA non-coding downstream 56711 65037353 ~ 65088607 (-)
G1574962 NA non-coding downstream 63610 65081107 ~ 65081708 (-)
G1574957 NA non-coding downstream 72525 65072457 ~ 65072793 (-)
G1575110 NA non-coding upstream 203735 65351176 ~ 65352246 (-)
G1575152 NA non-coding upstream 289334 65436775 ~ 65437651 (-)
G1575168 NA non-coding upstream 314480 65461921 ~ 65504693 (-)
G1575188 NA non-coding upstream 343466 65490907 ~ 65492002 (-)
G1575232 NA non-coding upstream 455400 65602841 ~ 65603086 (-)
G1573887 NA other downstream 174151 64970291 ~ 64971167 (-)
LOC110496680 LOC106589004 other downstream 900504 64017203 ~ 64244837 (-)
G1573054 NA other downstream 1130353 64013779 ~ 64014965 (-)
G1572487 NA other downstream 1654149 63435798 ~ 63491169 (-)
G1570695 NA other downstream 3479408 61665328 ~ 61665910 (-)
G1575088 NA other upstream 162602 65310043 ~ 65311051 (-)
G1575282 NA other upstream 650189 65797630 ~ 65798675 (-)
G1575457 NA other upstream 867028 66014469 ~ 66053735 (-)
G1575475 NA other upstream 908241 66055682 ~ 66056239 (-)
ppp1r11 ppp1r11 other upstream 1090657 66238098 ~ 66242725 (-)

Expression


Co-expression Network