G1575188


Basic Information

Item Value
gene id G1575188
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 65490907 ~ 65492002 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1802253
AACCCGTTGTCCATTATCGCCTATCTGCAGTCCGCGATTTACAGAACTGCACAACAAAGCGCAATAAATGGACAGCCTGTGGGGAGGTAACATTGACAACTGTTCACATGAGTGCCGAAATGATTGATTCAGTTCAAGAAGCGCTTCTGAGCGCTTTATTATTCTCAGGGCAGCGGCGTAGACGCCGTCCGTCTCGGCCAGGTCGGGTGCAGGTGTCCAGCGCCGCGTAATAGCTGCTGCAGACTAAATCCAAAAGGCTGCTCCGTTATAGAGTAGAAATTCTTCTGTCAGTCGAGTCTCCATCTCAAAGGGATGACAACGCAAACTTTCACTTGGATATCTGACCACACTGTCCTTTCAATGGATTCCATCCTTGTGTGCTGAAAAGCCTATCCAGAACTTTACGTAAAATACAAAGTCCTTCGAAAGCAGACAGAATACCGGGGGAAAGAGAATCTGTGTCACTCCCTCATATCGGTAACCGTACGTTTCGACTAGAAGTGGTGCCTCCGCTTGACAACTCTTCTCTTCGCTCCAAAATATTGTCCGCTCTGTGGGCGTGGGTGTAGGCGTGAACCTATTCAGCTAAATATGGGTAGCTGTGAAAGcctgtctgcagatgaagagATCCCAGTGAATGTCCCAAGAGACTGCTGGCACATTCTTGG

Function

GO: NA

KEGG:

id description

RNA

RNA id representative length rna type GC content exon number start site end site
TU1802253 True 668 lncRNA 0.49 2 65490907 65492002

Neighbor

gene id symbol gene type direction distance location
LOC110496698 LOC106570363 coding downstream 369851 65056656 ~ 65121056 (-)
LOC110496694 LOC106589019 coding downstream 502911 64973831 ~ 64987996 (-)
LOC110496691 LOC106589015 coding downstream 657584 64828329 ~ 64833323 (-)
LOC110496688 LOC106589014 coding downstream 721620 64766115 ~ 64769287 (-)
LOC110496684 kdm1b coding downstream 794903 64680203 ~ 64696004 (-)
LOC110496890 LOC106570358 coding upstream 22940 65514942 ~ 65601901 (-)
LOC110496703 NA coding upstream 118938 65610940 ~ 65620200 (-)
LOC110496706 LOC106589031 coding upstream 263119 65755121 ~ 65767988 (-)
xkr8.3 xkr8 coding upstream 278913 65770915 ~ 65781022 (-)
epb41a LOC106589039 coding upstream 402982 65894984 ~ 66039471 (-)
G1575152 NA non-coding downstream 53256 65436775 ~ 65437651 (-)
G1575110 NA non-coding downstream 138661 65351176 ~ 65352246 (-)
G1574998 NA non-coding downstream 343466 65145318 ~ 65147441 (-)
G1574995 NA non-coding downstream 347519 65143101 ~ 65143388 (-)
G1574976 NA non-coding downstream 383914 65105527 ~ 65106993 (-)
G1575232 NA non-coding upstream 110839 65602841 ~ 65603086 (-)
G1575278 NA non-coding upstream 188746 65680748 ~ 65689851 (-)
G1575289 LOC106589037 non-coding upstream 211374 65703376 ~ 65709595 (-)
G1575169 NA non-coding upstream 221766 65713768 ~ 65716640 (-)
G1575314 NA non-coding upstream 241689 65733691 ~ 65763466 (-)
G1575088 NA other downstream 179856 65310043 ~ 65311051 (-)
G1573887 NA other downstream 519740 64970291 ~ 64971167 (-)
LOC110496680 LOC106589004 other downstream 1246093 64017203 ~ 64244837 (-)
G1573054 NA other downstream 1475942 64013779 ~ 64014965 (-)
G1572487 NA other downstream 1999738 63435798 ~ 63491169 (-)
G1575282 NA other upstream 305628 65797630 ~ 65798675 (-)
G1575457 NA other upstream 522467 66014469 ~ 66053735 (-)
G1575475 NA other upstream 563680 66055682 ~ 66056239 (-)
ppp1r11 ppp1r11 other upstream 746096 66238098 ~ 66242725 (-)
G1575541 NA other upstream 809413 66301415 ~ 66305176 (-)

Expression


Co-expression Network