G1575318


Basic Information

Item Value
gene id G1575318
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 65740693 ~ 65742149 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1802413
TTACTAGATAAATGTCTGGATAGATTCTAGATTCCAGTAAGCAACTAATACAAGTATGTTATTCCTTCAATTAACATGAATACTCTTCCAGGAAATATGATGACAGACAAAAGCACACAGAGgcacatgttttttattttatttgaacacATAATTTGCTAACTAACATCTCAAATAGTCACAAAGTAGATAAACATTGTAGCAACTATTTAAAAATTTAACTCGTGAGGACTGTGTACATCATGCCATAAGGGTTTTCCCAGCAAGTCCCAGTCAGGTGATTATTTAGAAGTTGAACACGCATCTCACCTCCCACGTTCCCTTTGTATCCGTTGTAGATCTCCTTCAGGCGACGATAACGGAAGGCCAGTTTCCTCATCCACTCCACCCCGCCCTGGACTCCTGTGGCGGCGCCTACACCACTGGGGTTGTGGAAGCCATCCGCTAGGAAGTTGTAGGCGCTGAtaggaggaatgagagagagagagagatgtggctaGTTAGGAGAGATCGATGTTTTGTATGTGGCTAGTTAGGAGAGATATACGTTTTGTATGTTGCTAGTTAGGAGAGATCGATGTTTTGTATGTTGCTAGTTAGGAGAGATAGATGTTTTGTATGTTGCTAGTTAGGAGAGATAGATGTTTTGTATGTGGCTAGTTAGGAGAGATAGACGTTTTGTATGTGGCTAGTTAGGAGAGATAGACGTTTTGTATGTTGCTAGTTAGGAGAGATAGACGTTTTGTATGTGGCTAGTTAGGAGAGAGACACGTTTTGTATGTTGCTAGTTAGGAGAGATAGACGTTTTGTATGTTGCTAGTTAGGAGAGATAGACGTTTTGTATGTTGCTAGTTAGGAGAGATAGACGTTTTGTATGTTGCTAGTTAGGAGCGATAGATGTTTTGTATGTGGCTAGTTAGGAAAGTAGGGACTCTGTTGGTGGACATAAAATCATTATTACATTGGACTATCATCATACAGAGAGGTTTATATGTGACCTCCAAACTAAGGAGGGTATCTGAATGTCTTGGTTGTTGACAGTAGCGTCACAGACACACCTCAGATCCTGTCCGTTGTCATCAGAGGCCACGTCTTCAACATGAACCTGATCACACTCCTAAGAAGAGAAAAGGAAAAGTGGGGGGGGTGTCAACCGTTTAGTCGAAAATCGTCCCCGTTCAATCCAACATTCtgtcaggggcggcagggtagcctagtggttagagcggtggactagtaaccggaaggttgcaagttcaaatccccgagctgacaaggtacatctgtcgttctgcccctgaac

Function

NR:

description
unnamed protein product, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1802413 True 1303 lncRNA 0.43 2 65740693 65742149

Neighbor

gene id symbol gene type direction distance location
LOC110496703 NA coding downstream 120493 65610940 ~ 65620200 (-)
LOC110496890 LOC106570358 coding downstream 138792 65514942 ~ 65601901 (-)
LOC110496698 LOC106570363 coding downstream 619637 65056656 ~ 65121056 (-)
LOC110496694 LOC106589019 coding downstream 752697 64973831 ~ 64987996 (-)
LOC110496691 LOC106589015 coding downstream 907370 64828329 ~ 64833323 (-)
LOC110496706 LOC106589031 coding upstream 12972 65755121 ~ 65767988 (-)
xkr8.3 xkr8 coding upstream 28766 65770915 ~ 65781022 (-)
epb41a LOC106589039 coding upstream 152835 65894984 ~ 66039471 (-)
LOC110496714 LOC106589042 coding upstream 309486 66051635 ~ 66068096 (-)
LOC118941206 NA coding upstream 338305 66080454 ~ 66094549 (-)
G1575169 NA non-coding downstream 24053 65713768 ~ 65716640 (-)
G1575289 LOC106589037 non-coding downstream 31098 65703376 ~ 65709595 (-)
G1575278 NA non-coding downstream 50842 65680748 ~ 65689851 (-)
G1575232 NA non-coding downstream 137607 65602841 ~ 65603086 (-)
G1575188 NA non-coding downstream 248691 65490907 ~ 65492002 (-)
G1575320 NA non-coding upstream 1885 65744034 ~ 65744396 (-)
G1575332 NA non-coding upstream 26209 65768358 ~ 65768692 (-)
G1575333 NA non-coding upstream 26902 65769051 ~ 65769287 (-)
G1575335 NA non-coding upstream 34268 65776417 ~ 65776728 (-)
G1575088 NA other downstream 429642 65310043 ~ 65311051 (-)
G1573887 NA other downstream 769526 64970291 ~ 64971167 (-)
LOC110496680 LOC106589004 other downstream 1495879 64017203 ~ 64244837 (-)
G1573054 NA other downstream 1725728 64013779 ~ 64014965 (-)
G1572487 NA other downstream 2249524 63435798 ~ 63491169 (-)
G1575282 NA other upstream 55481 65797630 ~ 65798675 (-)
G1575457 NA other upstream 272320 66014469 ~ 66053735 (-)
G1575475 NA other upstream 313533 66055682 ~ 66056239 (-)
ppp1r11 ppp1r11 other upstream 495949 66238098 ~ 66242725 (-)
G1575541 NA other upstream 559266 66301415 ~ 66305176 (-)

Expression


Co-expression Network