G1575333



Basic Information


Item Value
gene id G1575333
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 65769051 ~ 65769287 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1802440
gccacctttagctgcttCAACTCAGTGACATTtatgggttttcaagcatgaactgctcttttcaagtcctgccacaacatctcaattgggattaggtctggattttgactaggccattacaaaacttcaaatgtgttgctttttaaccattttcatgtagacttgattgtgtgttttggatcattgtcttgctgtgtgacccagctgcgcttcagcttcctctccctgactgatgac

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1802440 True 237 lncRNA 0.43 1 65769051 65769287

Neighbor


gene id symbol gene type direction distance location
LOC110496706 LOC106589031 coding downstream 1063 65755121 ~ 65767988 (-)
LOC110496703 NA coding downstream 148851 65610940 ~ 65620200 (-)
LOC110496890 LOC106570358 coding downstream 167150 65514942 ~ 65601901 (-)
LOC110496698 LOC106570363 coding downstream 647995 65056656 ~ 65121056 (-)
LOC110496694 LOC106589019 coding downstream 781055 64973831 ~ 64987996 (-)
xkr8.3 xkr8 coding upstream 1628 65770915 ~ 65781022 (-)
epb41a LOC106589039 coding upstream 125697 65894984 ~ 66039471 (-)
LOC110496714 LOC106589042 coding upstream 282348 66051635 ~ 66068096 (-)
LOC118941206 NA coding upstream 311167 66080454 ~ 66094549 (-)
LOC118941204 NA coding upstream 344330 66113617 ~ 66117779 (-)
G1575332 NA non-coding downstream 359 65768358 ~ 65768692 (-)
G1575314 NA non-coding downstream 5585 65733691 ~ 65763466 (-)
G1575320 NA non-coding downstream 24655 65744034 ~ 65744396 (-)
G1575318 NA non-coding downstream 26902 65740693 ~ 65742149 (-)
G1575169 NA non-coding downstream 52411 65713768 ~ 65716640 (-)
G1575335 NA non-coding upstream 7130 65776417 ~ 65776728 (-)
G1575336 NA non-coding upstream 9158 65778445 ~ 65778752 (-)
G1575339 NA non-coding upstream 14008 65783295 ~ 65783523 (-)
G1575283 LOC105008066 non-coding upstream 23157 65792444 ~ 65796646 (-)
G1575088 NA other downstream 458000 65310043 ~ 65311051 (-)
G1573887 NA other downstream 797884 64970291 ~ 64971167 (-)
LOC110496680 LOC106589004 other downstream 1524237 64017203 ~ 64244837 (-)
G1573054 NA other downstream 1754086 64013779 ~ 64014965 (-)
G1572487 NA other downstream 2277882 63435798 ~ 63491169 (-)
G1575282 NA other upstream 28343 65797630 ~ 65798675 (-)
G1575457 NA other upstream 245182 66014469 ~ 66053735 (-)
G1575475 NA other upstream 286395 66055682 ~ 66056239 (-)
ppp1r11 ppp1r11 other upstream 468811 66238098 ~ 66242725 (-)
G1575541 NA other upstream 532128 66301415 ~ 66305176 (-)

Expression



Co-expression Network