G1575349


Basic Information

Item Value
gene id G1575349
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 65812935 ~ 65813585 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1802456
tttgccTTATATTTGTAACACAGGCATAGTATGTGGGTCTACGGGGTCAGACACAGACAATAATTGTTCTGTCAGACCTACTGATATTGCTTGGTAATACATTTAGAACACAAATTGTCACACTGACATGGCATACAAAACAGGCAAcactgacgagagagagagagagaaagagagagagagagagagagacagagagagagagacagagagagacagacacagagagagagagagagacagagagcgagagagacagagagacagagagacagagagagagagagagacagacagagagagacagagagagagagagagagagagatagagagacagagagagagagagagactgtggcaTTGAAAATACAATGGAGCCTTCTCTCCAcatcagcctgtgtgtgtgtgtggtgtgtgtgtgtcttgtcctAAGGGAACCAGACATGTCTTAATCACGTAGCCCCACACACCCCAACTGCATGCTAAAACATTGATAATTTCATTCCACTAAATCAAACAGACTGAGACAGTGCTGTCCTCCATTCCCTCACCTCTATTGGACGAAGAAAGGGGTGACCCCCCTCCTCGTAAACATTAGGGTccgcgtcccaaatggaaccctagtccttatatagaacactacataggg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1802456 True 651 lncRNA 0.46 1 65812935 65813585

Neighbor

gene id symbol gene type direction distance location
xkr8.3 xkr8 coding downstream 31913 65770915 ~ 65781022 (-)
LOC110496706 LOC106589031 coding downstream 44947 65755121 ~ 65767988 (-)
LOC110496703 NA coding downstream 192735 65610940 ~ 65620200 (-)
LOC110496890 LOC106570358 coding downstream 211034 65514942 ~ 65601901 (-)
LOC110496698 LOC106570363 coding downstream 691879 65056656 ~ 65121056 (-)
epb41a LOC106589039 coding upstream 81399 65894984 ~ 66039471 (-)
LOC110496714 LOC106589042 coding upstream 238050 66051635 ~ 66068096 (-)
LOC118941206 NA coding upstream 266869 66080454 ~ 66094549 (-)
LOC118941204 NA coding upstream 300032 66113617 ~ 66117779 (-)
LOC110496715 LOC106589043 coding upstream 323863 66136708 ~ 66167671 (-)
G1575348 LOC106589032 non-coding downstream 850 65810779 ~ 65812085 (-)
G1575347 NA non-coding downstream 4199 65807927 ~ 65808736 (-)
G1575340 NA non-coding downstream 13396 65799314 ~ 65799539 (-)
G1575283 LOC105008066 non-coding downstream 16289 65792444 ~ 65796646 (-)
G1575339 NA non-coding downstream 29412 65783295 ~ 65783523 (-)
G1575350 NA non-coding upstream 312 65813897 ~ 65814128 (-)
G1575354 NA non-coding upstream 6636 65820221 ~ 65821366 (-)
G1575355 NA non-coding upstream 7837 65821422 ~ 65821624 (-)
G1575360 NA non-coding upstream 16029 65829614 ~ 65830051 (-)
G1575401 NA non-coding upstream 73794 65887379 ~ 65888598 (-)
G1575282 NA other downstream 14260 65797630 ~ 65798675 (-)
G1575088 NA other downstream 501884 65310043 ~ 65311051 (-)
G1573887 NA other downstream 841768 64970291 ~ 64971167 (-)
LOC110496680 LOC106589004 other downstream 1568121 64017203 ~ 64244837 (-)
G1573054 NA other downstream 1797970 64013779 ~ 64014965 (-)
G1575457 NA other upstream 200884 66014469 ~ 66053735 (-)
G1575475 NA other upstream 242097 66055682 ~ 66056239 (-)
ppp1r11 ppp1r11 other upstream 424513 66238098 ~ 66242725 (-)
G1575541 NA other upstream 487830 66301415 ~ 66305176 (-)
LOC110496725 LOC106589055 other upstream 989839 66802870 ~ 66810492 (-)

Expression


Co-expression Network