G1575481



Basic Information


Item Value
gene id G1575481
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information


Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 66078114 ~ 66133797 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence


>TU1802633
caatcaaatgtatttataaaggcctttttacatcagctgatatctcaaagtgctgtacagaaacccagcctaaaaccccaaacagcaagcaatgcaggtgtagaagcacggtggctaggaaaatctccatagaaaggccagaacccaggaagaaacctagagaggaaccaggctatgaggggtggccagtcctcttctgtttgtgccgggtggagattataacagaacatggccaagatgttcaaatgttcatagatgaccagcagggtcaaataataataatcacagtggttgtagagggtgcaacaggtcagaacctcaggagtaaatgtcagttggtttttcatCATTCAGAgcatctctacctctcctgctgtctctagagagttgaaaacagcaggtctgggacaggtagcacgtccggtgaacaggtcagggttccatagccgcaggcagaacagttgaaactggagcagcagcacgaccaggtggact

Function


NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU1802633 True 495 lncRNA 0.47 2 66078114 66133797

Neighbor


gene id symbol gene type direction distance location
LOC110496714 LOC106589042 coding downstream 10018 66051635 ~ 66068096 (-)
epb41a LOC106589039 coding downstream 38643 65894984 ~ 66039471 (-)
xkr8.3 xkr8 coding downstream 297092 65770915 ~ 65781022 (-)
LOC110496706 LOC106589031 coding downstream 310126 65755121 ~ 65767988 (-)
LOC110496703 NA coding downstream 457914 65610940 ~ 65620200 (-)
LOC110496715 LOC106589043 coding upstream 3651 66136708 ~ 66167671 (-)
LOC110496892 LOC106589045 coding upstream 36899 66170696 ~ 66179591 (-)
LOC110496716 LOC106589044 coding upstream 46780 66180396 ~ 66215207 (-)
ppp1r11 ppp1r11 coding upstream 106727 66238098 ~ 66242725 (-)
ddx39b uap56 coding upstream 160316 66294113 ~ 66313899 (-)
G1575480 NA non-coding downstream 719 66077196 ~ 66077395 (-)
G1575478 NA non-coding downstream 2076 66075830 ~ 66076038 (-)
G1575472 NA non-coding downstream 29363 66046470 ~ 66048751 (-)
G1575456 NA non-coding downstream 67112 66010787 ~ 66011002 (-)
G1575454 NA non-coding downstream 68213 66009662 ~ 66009901 (-)
G1575510 NA non-coding upstream 84 66133881 ~ 66134171 (-)
G1575413 NA non-coding upstream 1026 66134823 ~ 66135289 (-)
G1575514 NA non-coding upstream 18576 66152373 ~ 66152767 (-)
G1575475 NA other downstream 21875 66055682 ~ 66056239 (-)
G1575457 NA other downstream 24379 66014469 ~ 66053735 (-)
G1575282 NA other downstream 279439 65797630 ~ 65798675 (-)
G1575088 NA other downstream 767063 65310043 ~ 65311051 (-)
G1573887 NA other downstream 1106947 64970291 ~ 64971167 (-)
G1575541 NA other upstream 167618 66301415 ~ 66305176 (-)
LOC110496725 LOC106589055 other upstream 669627 66802870 ~ 66810492 (-)
G1575774 NA other upstream 692785 66826582 ~ 66826877 (-)
LOC118941007 NA other upstream 736094 66857937 ~ 66870926 (-)

Expression



Co-expression Network