G1575704


Basic Information

Item Value
gene id G1575704
gene name NA
gene type non-coding
species rainbow trout (Oncorhynchus mykiss)
category of species economic fish

Chromosome Information

Item Value
chromosome id NC_048582.1
NCBI id CM023236.2
chromosome length 74657750
location 66682916 ~ 66683695 (-)
genome version USDA_OmykA_1.1_2020_rainbow_trout_Genome

Sequence

>TU1802890
cttgaattgaattgaattgaattgagagagagagagagatagagagagagagagagagagagagagagagagagagagagagaccttttgtgagtgcaatgtttactggtcatttttgttgtttatttcacttttgttaagAGTCTacttcacttgttttggcaatgtttcacatgccaataaaacccttaaattgaattgaaaattgaattgacaaagagacagacagagaaagagataggtctgctcaccaaccaagaattcacaaaacggGACAAACACCAATTTGAGACTCCGCATAAAGAATTTTgctaaaatatcctctgtgtacaatgtaaaacaccaaataatgcatgcagggcaAAATTAGGATGATACCCACTTGGATGATacccagaaaagagctgttaaaatctacaaccacctaaaaggaagcaattcccaaaccttccataacaaagccatcaccttcagagagatgaacctggagaagagtcccctaagcaagctggtcctggggctctgttcacaaacacaaacagaccccacagagccccaggacagcaacacaattagacccaaccaaatcatgagaaaacaaaaagataattacttcacACCTTGGAAAAAATTtacaaaacagagcaaactagaacactatttggccctaaacagagagtacaccgtgGGCAGAATACCTgaacactgtgactgacccaaaattaaggaaatctttgactatgtacagactcagtgagcatagccttgctattgagaaag

Function

NR:

description
unnamed protein product

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU1802890 True 780 lncRNA 0.40 1 66682916 66683695

Neighbor

gene id symbol gene type direction distance location
ddx39b uap56 coding downstream 369017 66294113 ~ 66313899 (-)
ppp1r11 ppp1r11 coding downstream 440191 66238098 ~ 66242725 (-)
LOC110496716 LOC106589044 coding downstream 467709 66180396 ~ 66215207 (-)
LOC110496892 LOC106589045 coding downstream 503325 66170696 ~ 66179591 (-)
LOC110496715 LOC106589043 coding downstream 515245 66136708 ~ 66167671 (-)
LOC110496727 LOC106589058 coding upstream 9643 66693338 ~ 66696327 (-)
LOC110496726 LOC106593810 coding upstream 64487 66748182 ~ 66775081 (-)
LOC110496895 NA coding upstream 103353 66787048 ~ 66788994 (-)
LOC110496725 LOC106589055 coding upstream 119175 66802870 ~ 66810492 (-)
LOC118941007 NA coding upstream 174242 66857937 ~ 66870926 (-)
G1575664 NA non-coding downstream 79846 66601914 ~ 66603070 (-)
G1575651 NA non-coding downstream 123757 66558557 ~ 66559159 (-)
G1575631 NA non-coding downstream 166334 66516081 ~ 66516582 (-)
G1575630 NA non-coding downstream 167622 66514976 ~ 66515294 (-)
G1575628 NA non-coding downstream 179180 66503390 ~ 66503736 (-)
G1575705 NA non-coding upstream 1516 66685211 ~ 66688975 (-)
G1575706 NA non-coding upstream 7444 66691139 ~ 66691466 (-)
G1575707 NA non-coding upstream 7896 66691591 ~ 66691945 (-)
G1575708 NA non-coding upstream 8257 66691952 ~ 66692361 (-)
G1575711 NA non-coding upstream 14378 66698073 ~ 66698297 (-)
G1575541 NA other downstream 377740 66301415 ~ 66305176 (-)
G1575475 NA other downstream 626677 66055682 ~ 66056239 (-)
G1575457 NA other downstream 629181 66014469 ~ 66053735 (-)
G1575282 NA other downstream 884241 65797630 ~ 65798675 (-)
G1575774 NA other upstream 142887 66826582 ~ 66826877 (-)
LOC118941008 NA other upstream 374482 67058124 ~ 67058673 (-)
G1575977 NA other upstream 519506 67203201 ~ 67203487 (-)

Expression


Co-expression Network